6M58
Crystal structure of a complex between human serum albumin and the antibody Fab SL335
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Serum albumin-like | 8033047 | 3001552 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Serum albumin-like | 8033045 | 3001552 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Serum albumin-like | 8033044 | 3001552 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Serum albumin-like | 8033045 | 3001552 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Serum albumin-like | 8033044 | 3001552 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Serum albumin-like | 8033047 | 3001552 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Serum_albumin | e6m58A2 | A: alpha complex topology | X: Serum albumin-like (From Topology) | H: Serum albumin-like (From Topology) | T: Serum albumin-like | F: Serum_albumin | ECOD (1.6) |
D [auth B] | Serum_albumin | e6m58B3 | A: alpha complex topology | X: Serum albumin-like (From Topology) | H: Serum albumin-like (From Topology) | T: Serum albumin-like | F: Serum_albumin | ECOD (1.6) |
B [auth H] | C1-set_1 | e6m58H1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
B [auth H] | V-set_10 | e6m58H2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_10 | ECOD (1.6) |
E [auth C] | C1-set_1 | e6m58C2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
E [auth C] | V-set_10 | e6m58C1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_10 | ECOD (1.6) |
C [auth L] | C1-set_4 | e6m58L1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
C [auth L] | V-set | e6m58L2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
F [auth D] | C1-set_4 | e6m58D1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
F [auth D] | V-set | e6m58D2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
A, D [auth B] | Fab SL335, anti-HSA | 1C-LIKE | Homo sapiens (human) | ALB*01 | R-LIKE-DOMAIN ALB (Pr 25-609) | IG | FAB-GAMMA-1_KAPPA | IMGT (202438-0) |
B [auth H], E [auth C] | Fab SL335, anti-HSA | VH-CH1 | Homo sapiens (human) | IGHV3-21*01, IGHV3-21*02, IGHV3-21*04, IGHV3-21*03, IGHV3-21*06, IGHJ4*01, IGHJ4*02, IGHJ4*03, IGHG1*03, IGHG1*08, IGHG1*06 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_KAPPA | IMGT (202438-0) |
C [auth L], F [auth D] | Fab SL335, anti-HSA | L-KAPPA | Homo sapiens (human) | IGKV3-15*01, IGKV3D-15*01, IGKJ2*01, IGKJ5*01, IGKJ2*02, IGKC*05 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-1_KAPPA | IMGT (202438-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
B [auth H], E [auth C] | Heavy Chain | IGHV3 | - | serum albumin | SAbDab (2024-09-27) |
C [auth L], F [auth D] | Light Chain | IGKV3 | Kappa | serum albumin | SAbDab (2024-09-27) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D [auth B] | PF00273 | Serum albumin family (Serum_albumin) | Serum albumin family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, D [auth B] | IPR020857 | Serum albumin, conserved site | Conserved Site |
A, D [auth B] | IPR000264 | ALB/AFP/VDB | Family |
A, D [auth B] | IPR014760 | Serum albumin, N-terminal | Domain |
A, D [auth B] | IPR020858 | Serum albumin-like | Homologous Superfamily |
A, D [auth B] | IPR021177 | Serum albumin/Alpha-fetoprotein/Afamin | Family |