6M3Q
Crystal structure of AnkB/beta4-spectrin complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth E] | SCOP2 Family | ZU5 domain | 8048257 | 4000379 | SCOP2 (2022-06-29) |
A [auth E] | SCOP2 Family | ZU5 domain | 8102946 | 4000379 | SCOP2 (2022-06-29) |
A [auth E] | SCOP2 Family | UPA domain-like | 8102953 | 4005210 | SCOP2 (2022-06-29) |
A [auth E] | SCOP2 Superfamily | ZU5 domain-like | 8102949 | 3002026 | SCOP2 (2022-06-29) |
A [auth E] | SCOP2 Superfamily | ZU5 domain-like | 8102950 | 3002026 | SCOP2 (2022-06-29) |
A [auth E] | SCOP2 Superfamily | UPA domain-like | 8102979 | 3002775 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth E] | PF17809 | e6m3qE3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: UPA domain | F: PF17809 | ECOD (1.6) |
A [auth E] | PF00791 | e6m3qE1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related (From Topology) | T: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | F: PF00791 | ECOD (1.6) |
B [auth F] | PF00435 | e6m3qF3 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat (From Topology) | T: Spectrin repeat | F: PF00435 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth F] | 1.20.58.60 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth E] | PF17809 | UPA domain (UPA_2) | UPA domain | The UPA domain is conserved in UNC5, PIDD, and Ankyrins. It has a beta sandwich structure [1]. | Domain |
A [auth E] | PF00791 | ZU5 domain (ZU5) | ZU5 domain | - | Family |
B [auth F] | PF00435 | Spectrin repeat (Spectrin) | Spectrin repeat | Spectrin repeat-domains are found in several proteins involved in cytoskeletal structure. These include spectrin, alpha-actinin and dystrophin. The sequence repeat used in this family is taken from the structural repeat in reference [2]. The spectr ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth E] | IPR040745 | Ankyrin, UPA domain | Domain |
A [auth E] | IPR000906 | ZU5 domain | Domain |
A [auth E] | IPR002110 | Ankyrin repeat | Repeat |
A [auth E] | IPR051165 | Multifunctional Ankyrin Repeat Domain-Containing Protein | Family |
A [auth E] | IPR000488 | Death domain | Domain |
A [auth E] | IPR036770 | Ankyrin repeat-containing domain superfamily | Homologous Superfamily |
A [auth E] | IPR011029 | Death-like domain superfamily | Homologous Superfamily |
B [auth F] | IPR001589 | Actinin-type actin-binding domain, conserved site | Conserved Site |
B [auth F] | IPR036872 | CH domain superfamily | Homologous Superfamily |
B [auth F] | IPR016343 | Spectrin, beta subunit | Family |
B [auth F] | IPR002017 | Spectrin repeat | Repeat |
B [auth F] | IPR001849 | Pleckstrin homology domain | Domain |
B [auth F] | IPR001605 | Pleckstrin homology domain, spectrin-type | Domain |
B [auth F] | IPR041681 | Pleckstrin homology domain 9 | Domain |
B [auth F] | IPR001715 | Calponin homology domain | Domain |
B [auth F] | IPR011993 | PH-like domain superfamily | Homologous Superfamily |
B [auth F] | IPR018159 | Spectrin/alpha-actinin | Repeat |