Crystal structure of Arabidopsis ARID5 ARID-PHD cassette in complex with H3K4me3 peptide and DNA
External Resource: Annotation
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | PF01388 | e6lqfA1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF01388 | ECOD (1.6) |
A | PF00628 | e6lqfA2 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: FYVE/PHD zinc finger | F: PF00628 | ECOD (1.6) |
Chains | Accession | Name | Description | Comments | Source |
---|
| PF01388 | ARID/BRIGHT DNA binding domain (ARID) | ARID/BRIGHT DNA binding domain | This domain is know as ARID for AT-Rich Interaction Domain [1], and also known as the BRIGHT domain [3]. | Domain |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|
| AT-rich interactive domain-containing protein 4 | | - | |
B [auth P] | 15-mer peptide from Histone H3.2 | | - | |
C [auth B], D [auth C] | DNA (5'-D(*TP*TP*TP*AP*GP*AP*TP*CP*TP*AP*AP*A)-3') | - | - | - |
Protein Modification Annotation