6LI1
Crystal structure of GPR52 ligand free form with flavodoxin fusion
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | 7tm_1_2 | e6li1A1 | A: alpha bundles | X: Family A G protein-coupled receptor-like (From Topology) | H: Family A G protein-coupled receptor-like (From Topology) | T: Family A G protein-coupled receptor-like | F: 7tm_1_2 | ECOD (1.6) |
A | Flavodoxin_1 | e6li1A2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Flavoproteins/Phosphotyrosine protein phosphatases-like | T: Flavoproteins | F: Flavodoxin_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00001 | 7 transmembrane receptor (rhodopsin family) (7tm_1) | 7 transmembrane receptor (rhodopsin family) | - | Family | |
PF00258 | Flavodoxin (Flavodoxin_1) | Flavodoxin | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000276 | G protein-coupled receptor, rhodopsin-like | Family | |
IPR050125 | G-protein coupled receptor opsins | Family | |
IPR017452 | GPCR, rhodopsin-like, 7TM | Domain | |
IPR010087 | Flavodoxin, short chain | Family | |
IPR050619 | Flavodoxin | Family | |
IPR001226 | Flavodoxin, conserved site | Conserved Site | |
IPR001094 | Flavodoxin-like | Domain | |
IPR029039 | Flavoprotein-like superfamily | Homologous Superfamily | |
IPR008254 | Flavodoxin/nitric oxide synthase | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q9Y2T5 | : 
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Rhodopsin-like receptors and pumps | G-protein coupled receptors, family A |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | G Protein-Coupled Receptors: Class A | Orphan GPR52 class A receptor, ligand-free form with flavodoxin fusion |