6KI3
The crystal structure of AsfvAP:dF commplex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | AP_endonuc_2 | e6ki3A1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: AP_endonuc_2 | ECOD (1.6) |
E [auth B] | AP_endonuc_2 | e6ki3B1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: AP_endonuc_2 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, E [auth B] | PF01261 | Xylose isomerase-like TIM barrel (AP_endonuc_2) | Xylose isomerase-like TIM barrel | This TIM alpha/beta barrel structure is found in xylose isomerase (Swiss:P19148) and in endonuclease IV (Swiss:P12638, EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, E [auth B] | IPR001719 | AP endonuclease 2 | Family |
A, E [auth B] | IPR036237 | Xylose isomerase-like superfamily | Homologous Superfamily |
A, E [auth B] | IPR013022 | Xylose isomerase-like, TIM barrel domain | Domain |
A, E [auth B] | IPR018246 | AP endonuclease 2, zinc binding site | Binding Site |