6K00
Crystal structure A of ceNAP1-H2A-H2B complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth D] | d6k00d1 | All alpha proteins | Histone-fold | Histone-fold | automated matches | automated matches | (Caenorhabditis elegans ) [TaxId: 6239 ], (Caenorhabditis elegans ) [TaxId: 6239 ], | SCOPe (2.08) |
A | d6k00a_ | Alpha and beta proteins (a+b) | NAP-like | NAP-like | automated matches | automated matches | (Caenorhabditis elegans ) [TaxId: 6239 ], | SCOPe (2.08) |
B | d6k00b1 | Alpha and beta proteins (a+b) | NAP-like | NAP-like | automated matches | automated matches | (Caenorhabditis elegans ) [TaxId: 6239 ], | SCOPe (2.08) |
B | d6k00b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Caenorhabditis elegans ) [TaxId: 6239 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth D] | PF00125 | e6k00D1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
A | PF00956 | e6k00A1 | A: a+b two layers | X: NAP-like (From Topology) | H: NAP-like (From Topology) | T: NAP-like | F: PF00956 | ECOD (1.6) |
B | PF00956 | e6k00B1 | A: a+b two layers | X: NAP-like (From Topology) | H: NAP-like (From Topology) | T: NAP-like | F: PF00956 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth D] | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth D] | PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family |
PF00956 | Nucleosome assembly protein (NAP) (NAP) | Nucleosome assembly protein (NAP) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth D] | IPR009072 | Histone-fold | Homologous Superfamily |
C [auth D] | IPR007125 | Histone H2A/H2B/H3 | Domain |
C [auth D] | IPR000558 | Histone H2B | Family |
C [auth D] | IPR009072 | Histone-fold | Homologous Superfamily |
C [auth D] | IPR007125 | Histone H2A/H2B/H3 | Domain |
C [auth D] | IPR002119 | Histone H2A | Family |
C [auth D] | IPR032454 | Histone H2A, C-terminal domain | Domain |
C [auth D] | IPR032458 | Histone H2A conserved site | Conserved Site |
IPR002164 | Nucleosome assembly protein (NAP) | Family | |
IPR037231 | NAP-like superfamily | Homologous Superfamily |