Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth E]Claudin_2e6jp8E1 A: alpha bundlesX: Bromodomain-likeH: Claudin (From Topology)T: ClaudinF: Claudin_2ECOD (1.6)
BVGCC_beta4Aa_N,SH3_1_2e6jp8B1 A: beta barrelsX: SH3H: SH3T: SH3F: VGCC_beta4Aa_N,SH3_1_2ECOD (1.6)
CGuanylate_kine6jp8C1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Guanylate_kinECOD (1.6)
D [auth A]EF-hand_7_6e6jp8A4 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_6ECOD (1.6)
D [auth A]Ion_transe6jp8A2 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_transECOD (1.6)
D [auth A]Ca_chan_IQe6jp8A6 A: extended segmentsX: Voltage gated calcium channel IQ domain (From Topology)H: Voltage gated calcium channel IQ domain (From Topology)T: Voltage gated calcium channel IQ domainF: Ca_chan_IQECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth E]1.20.140.150 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (utative)
B2.30.30.40 Mainly Beta Roll SH3 type barrels. SH3 DomainsCATH (utative)
C3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth E]PF13903PMP-22/EMP/MP20/Claudin tight junction (Claudin_2)PMP-22/EMP/MP20/Claudin tight junction- Family
B, C
PF00625Guanylate kinase (Guanylate_kin)Guanylate kinase- Domain
B, C
PF12052Voltage gated calcium channel subunit beta domain 4Aa N terminal (VGCC_beta4Aa_N)Voltage gated calcium channel subunit beta domain 4Aa N terminalThe beta subunit of voltage gated calcium channels is coded for by four genes 1-4. Gene 4 can produce two types of beta4A domain (beta4Aa and beta4Ab) according to how the gene splicing is carried out. This family is part of the beta4Aa N terminal do ...The beta subunit of voltage gated calcium channels is coded for by four genes 1-4. Gene 4 can produce two types of beta4A domain (beta4Aa and beta4Ab) according to how the gene splicing is carried out. This family is part of the beta4Aa N terminal domain. It is made up of an alpha helix and a beta strand. It is thought to regulate the channel properties through protein-protein interactions with non Ca channel proteins. [1]
Domain
D [auth A]PF16905Voltage-dependent L-type calcium channel, IQ-associated (GPHH)Voltage-dependent L-type calcium channel, IQ-associated- Family
D [auth A]PF08763Voltage gated calcium channel IQ domain (Ca_chan_IQ)Voltage gated calcium channel IQ domainVoltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin [1]. ...Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin [1]. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Domain
D [auth A]PF08016Polycystin cation channel (PKD_channel)Polycystin cation channel- Family
D [auth A]PF00520Ion transport protein (Ion_trans)Ion transport protein- Family
E [auth F]PF08399VWA N-terminal (VWA_N)VWA N-terminal- Family
E [auth F]PF00092von Willebrand factor type A domain (VWA)von Willebrand factor type A domain- Domain
E [auth F]PF08473Neuronal voltage-dependent calcium channel alpha 2acd (VGCC_alpha2)Neuronal voltage-dependent calcium channel alpha 2acd- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth E]Voltage-dependent calcium channel gamma-1 subunit
B, C
Voltage-dependent L-type calcium channel subunit beta-1
D [auth A]Voltage-dependent L-type calcium channel subunit alpha-1S
E [auth F]Voltage-dependent calcium channel subunit alpha-2/delta-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth E]IPR005421Voltage-dependent calcium channel, gamma-1 subunitFamily
A [auth E]IPR004031PMP-22/EMP/MP20/ClaudinFamily
A [auth E]IPR008368Voltage-dependent calcium channel, gamma subunitFamily
B, C
IPR001452SH3 domainDomain
B, C
IPR008145Guanylate kinase/L-type calcium channel beta subunitDomain
B, C
IPR036028SH3-like domain superfamilyHomologous Superfamily
B, C
IPR005443Voltage-dependent calcium channel, L-type, beta-1 subunitFamily
B, C
IPR046937Voltage-dependent L-type calcium channel subunit beta-1-4, N-terminal A domainDomain
B, C
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B, C
IPR000584Voltage-dependent calcium channel, L-type, beta subunitFamily
D [auth A]IPR005821Ion transport domainDomain
D [auth A]IPR005446Voltage-dependent calcium channel, L-type, alpha-1 subunitFamily
D [auth A]IPR014873Voltage-dependent calcium channel, alpha-1 subunit, IQ domainDomain
D [auth A]IPR050599Voltage-dependent calcium channel alpha-1 subunitFamily
D [auth A]IPR005450Voltage-dependent calcium channel, L-type, alpha-1S subunitFamily
D [auth A]IPR002077Voltage-dependent calcium channel, alpha-1 subunitFamily
D [auth A]IPR031688Voltage-gated calcium channel subunit alpha, C-terminalDomain
D [auth A]IPR031649Voltage-dependent L-type calcium channel, IQ-associated domainDomain
D [auth A]IPR027359Voltage-dependent channel domain superfamilyHomologous Superfamily
E [auth F]IPR051173Voltage-dependent calcium channel subunit alpha-2/deltaFamily
E [auth F]IPR013680Voltage-dependent calcium channel, alpha-2/delta subunit, conserved regionDomain
E [auth F]IPR013608VWA N-terminalDomain
E [auth F]IPR002035von Willebrand factor, type ADomain
E [auth F]IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily