6JLZ
P-eIF2a - eIF2B complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | NagB/RpiA/CoA transferase-like | 8100680 | 3000693 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | NagB/RpiA/CoA transferase-like | 8100680 | 3000693 | SCOP2B (2022-06-29) |
K [auth L] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8042149 | 3000135 | SCOP2B (2022-06-29) |
K [auth L] | SCOP2B Superfamily | eIF2alpha middle domain-like | 8042148 | 3001761 | SCOP2B (2022-06-29) |
L [auth M] | SCOP2B Superfamily | eIF2alpha middle domain-like | 8042148 | 3001761 | SCOP2B (2022-06-29) |
L [auth M] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8042149 | 3000135 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01008 | e6jlzA1 | A: alpha bundles | X: Translation initiation factor eIF-2B delta subunit N-terminal helical domain (From Topology) | H: Translation initiation factor eIF-2B delta subunit N-terminal helical domain (From Topology) | T: Translation initiation factor eIF-2B delta subunit N-terminal helical domain | F: PF01008 | ECOD (1.6) |
A | PF01008 | e6jlzA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NagB/RpiA/CoA transferase-like | F: PF01008 | ECOD (1.6) |
B | PF01008 | e6jlzB1 | A: alpha bundles | X: Translation initiation factor eIF-2B delta subunit N-terminal helical domain (From Topology) | H: Translation initiation factor eIF-2B delta subunit N-terminal helical domain (From Topology) | T: Translation initiation factor eIF-2B delta subunit N-terminal helical domain | F: PF01008 | ECOD (1.6) |
B | PF01008 | e6jlzB2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NagB/RpiA/CoA transferase-like | F: PF01008 | ECOD (1.6) |
C | PF01008 | e6jlzC2 | A: alpha bundles | X: Translation initiation factor eIF-2B delta subunit N-terminal helical domain (From Topology) | H: Translation initiation factor eIF-2B delta subunit N-terminal helical domain (From Topology) | T: Translation initiation factor eIF-2B delta subunit N-terminal helical domain | F: PF01008 | ECOD (1.6) |
C | PF01008 | e6jlzC1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NagB/RpiA/CoA transferase-like | F: PF01008 | ECOD (1.6) |
D | PF01008 | e6jlzD2 | A: alpha bundles | X: Translation initiation factor eIF-2B delta subunit N-terminal helical domain (From Topology) | H: Translation initiation factor eIF-2B delta subunit N-terminal helical domain (From Topology) | T: Translation initiation factor eIF-2B delta subunit N-terminal helical domain | F: PF01008 | ECOD (1.6) |
D | PF01008 | e6jlzD1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NagB/RpiA/CoA transferase-like | F: PF01008 | ECOD (1.6) |
E | F_UNCLASSIFIED | e6jlzE2 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: F_UNCLASSIFIED | ECOD (1.6) |
E | PF00483 | e6jlzE1 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: PF00483 | ECOD (1.6) |
F | F_UNCLASSIFIED | e6jlzF2 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: F_UNCLASSIFIED | ECOD (1.6) |
F | PF00483 | e6jlzF1 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: PF00483 | ECOD (1.6) |
H | PF01008 | e6jlzH1 | A: alpha bundles | X: Translation initiation factor eIF-2B delta subunit N-terminal helical domain (From Topology) | H: Translation initiation factor eIF-2B delta subunit N-terminal helical domain (From Topology) | T: Translation initiation factor eIF-2B delta subunit N-terminal helical domain | F: PF01008 | ECOD (1.6) |
H | PF01008 | e6jlzH2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NagB/RpiA/CoA transferase-like | F: PF01008 | ECOD (1.6) |
G | PF01008 | e6jlzG1 | A: alpha bundles | X: Translation initiation factor eIF-2B delta subunit N-terminal helical domain (From Topology) | H: Translation initiation factor eIF-2B delta subunit N-terminal helical domain (From Topology) | T: Translation initiation factor eIF-2B delta subunit N-terminal helical domain | F: PF01008 | ECOD (1.6) |
G | PF01008 | e6jlzG2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NagB/RpiA/CoA transferase-like | F: PF01008 | ECOD (1.6) |
I | PF00132 | e6jlzI1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: PF00132 | ECOD (1.6) |
I | PF00483 | e6jlzI2 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: PF00483 | ECOD (1.6) |
J | PF00132 | e6jlzJ2 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: PF00132 | ECOD (1.6) |
J | PF00483 | e6jlzJ1 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: PF00483 | ECOD (1.6) |
K [auth L] | PF00575 | e6jlzL2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00575 | ECOD (1.6) |
K [auth L] | PF07541 | e6jlzL1 | A: alpha arrays | X: HhH/H2TH | H: eIF2alpha middle domain (From Topology) | T: eIF2alpha middle domain | F: PF07541 | ECOD (1.6) |
L [auth M] | PF00575 | e6jlzM2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00575 | ECOD (1.6) |
L [auth M] | PF07541 | e6jlzM1 | A: alpha arrays | X: HhH/H2TH | H: eIF2alpha middle domain (From Topology) | T: eIF2alpha middle domain | F: PF07541 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
K [auth L] | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (utative) |
K [auth L] | 1.10.150.190 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (utative) |
L [auth M] | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (utative) |
L [auth M] | 1.10.150.190 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01008 | Initiation factor 2 subunit family (IF-2B) | Initiation factor 2 subunit family | - | Family | |
PF01008 | Initiation factor 2 subunit family (IF-2B) | Initiation factor 2 subunit family | - | Family | |
PF00483 | Nucleotidyl transferase (NTP_transferase) | Nucleotidyl transferase | - | Family | |
PF01008 | Initiation factor 2 subunit family (IF-2B) | Initiation factor 2 subunit family | - | Family | |
PF00483 | Nucleotidyl transferase (NTP_transferase) | Nucleotidyl transferase | - | Family | |
PF00132 | Bacterial transferase hexapeptide (six repeats) (Hexapep) | Bacterial transferase hexapeptide (six repeats) | - | Repeat | |
K [auth L], L [auth M] | PF07541 | Eukaryotic translation initiation factor 2 alpha subunit (EIF_2_alpha) | Eukaryotic translation initiation factor 2 alpha subunit | - | Family |
K [auth L], L [auth M] | PF00575 | S1 RNA binding domain (S1) | S1 RNA binding domain | The S1 domain occurs in a wide range of RNA associated proteins. It is structurally similar to cold shock protein which binds nucleic acids. The S1 domain has an OB-fold structure. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
K [auth L], L [auth M] | SEP | Parent Component: SER :  AA0037 :  O-phospho-L-serine MOD:00046 |