6JE4 | pdb_00006je4

Crystal structure of Nme1Cas9-sgRNA-dsDNA dimer mediated by double protein inhibitor AcrIIC3 monomers

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
KNDKe6je4K1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: NDKECOD (v294.1)
OV-sete6je4O1 A: a/b three-layered sandwichesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF: V-setECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth I],
J,
S,
T		AcrIIC3- - -
D [auth B],
I [auth F],
N [auth L],
R [auth P]		sgRNA---
C [auth D],
H,
M [auth N],
Q [auth R]		non-target DNA strand---
B [auth C],
G,
L [auth M],
P [auth Q]		target DNA strand---
A,
F [auth E],
K,
O		CRISPR-associated endonuclease Cas9 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
F [auth E],
K,
O		IPR036397Ribonuclease H superfamilyHomologous Superfamily
A,
F [auth E],
K,
O		IPR041383RuvC endonuclease subdomain 3Domain
A,
F [auth E],
K,
O		IPR028629CRISPR-associated endonuclease Cas9Family
A,
F [auth E],
K,
O		IPR033114Cas9-type HNH domainDomain
A,
F [auth E],
K,
O		IPR003615HNH nucleaseDomain