6J0B

Cryo-EM Structure of an Extracellular Contractile Injection System, PVC sheath-tube complex in extended state


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APhage_sheath_1Ce6j0bA2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
APhage_sheath_1e6j0bA1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
BPhage_sheath_1Ce6j0bB2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
BPhage_sheath_1e6j0bB1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
CPhage_sheath_1Ce6j0bC2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
CPhage_sheath_1e6j0bC1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
DPhage_sheath_1Ce6j0bD2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
DPhage_sheath_1e6j0bD1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
EPhage_sheath_1Ce6j0bE2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
EPhage_sheath_1e6j0bE1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
FPhage_sheath_1Ce6j0bF2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
FPhage_sheath_1e6j0bF1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
GPhage_sheath_1Ce6j0bG2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
GPhage_sheath_1e6j0bG1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
HPhage_sheath_1Ce6j0bH2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
HPhage_sheath_1e6j0bH1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
IPhage_sheath_1Ce6j0bI2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
IPhage_sheath_1e6j0bI1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
JPhage_sheath_1Ce6j0bJ2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
JPhage_sheath_1e6j0bJ1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
KPhage_sheath_1Ce6j0bK2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
KPhage_sheath_1e6j0bK1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
LPhage_sheath_1Ce6j0bL2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
LPhage_sheath_1e6j0bL1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
M [auth a]UNK_F_TYPEe6j0ba1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UNK_F_TYPEECOD (1.6)
N [auth b]UNK_F_TYPEe6j0bb1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UNK_F_TYPEECOD (1.6)
O [auth c]UNK_F_TYPEe6j0bc1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UNK_F_TYPEECOD (1.6)
P [auth d]UNK_F_TYPEe6j0bd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UNK_F_TYPEECOD (1.6)
Q [auth e]UNK_F_TYPEe6j0be1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UNK_F_TYPEECOD (1.6)
R [auth f]UNK_F_TYPEe6j0bf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UNK_F_TYPEECOD (1.6)
S [auth g]UNK_F_TYPEe6j0bg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UNK_F_TYPEECOD (1.6)
T [auth h]UNK_F_TYPEe6j0bh1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UNK_F_TYPEECOD (1.6)
U [auth i]UNK_F_TYPEe6j0bi1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UNK_F_TYPEECOD (1.6)
V [auth j]UNK_F_TYPEe6j0bj1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UNK_F_TYPEECOD (1.6)
W [auth k]UNK_F_TYPEe6j0bk1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UNK_F_TYPEECOD (1.6)
X [auth l]UNK_F_TYPEe6j0bl1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: UNK_F_TYPEECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF17482Phage tail sheath C-terminal domain (Phage_sheath_1C)Phage tail sheath C-terminal domainThis entry represents the C-terminal domain in a variety of phage tail sheath proteins [4].Domain
A, B, C, D, E
PF04984Phage tail sheath protein subtilisin-like domain (Phage_sheath_1)Phage tail sheath protein subtilisin-like domainThis entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure.Domain
A, B, C, D, E
PF06841T4-like virus tail tube protein gp19 (Phage_T4_gp19)T4-like virus tail tube protein gp19- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage