6IW5
Crystal structure of YFV-China sE in prefusion state
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Flavi_glycop_C | e6iw5A2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
A | Flavi_glycoprot | e6iw5A1 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Flavi_glycoprot | ECOD (1.6) |
B | Flavi_glycop_C | e6iw5B2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
B | Flavi_glycoprot | e6iw5B1 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Flavi_glycoprot | ECOD (1.6) |
C | Flavi_glycop_C | e6iw5C1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
C | Flavi_glycoprot | e6iw5C2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Flavi_glycoprot | ECOD (1.6) |
D | Flavi_glycop_C | e6iw5D1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
D | Flavi_glycoprot | e6iw5D2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Flavi_glycoprot | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00869 | Flavivirus glycoprotein, central and dimerisation domains (Flavi_glycoprot) | Flavivirus glycoprotein, central and dimerisation domains | - | Domain | |
PF02832 | Flavivirus glycoprotein, immunoglobulin-like domain (Flavi_glycop_C) | Flavivirus glycoprotein, immunoglobulin-like domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038345 | Flavivirus envelope glycoprotein E, Stem/Anchor domain superfamily | Homologous Superfamily | |
IPR026470 | Flavivirus envelope glycoprotein E, Stem/Anchor domain | Domain | |
IPR011998 | Envelope glycoprotein E, central and dimerisation domain, flavivirus | Domain | |
IPR013755 | Flaviviral glycoprotein E, central domain, subdomain 1 | Homologous Superfamily | |
IPR038055 | Flaviviral glycoprotein E, dimerisation domain | Homologous Superfamily | |
IPR014756 | Immunoglobulin E-set | Homologous Superfamily | |
IPR027287 | Glycoprotein E, immunoglobulin-like domain, flavivirus | Domain | |
IPR013756 | Flaviviral glycoprotein E, central domain, subdomain 2 | Homologous Superfamily | |
IPR000336 | Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamily | Homologous Superfamily | |
IPR036253 | Flavivirus glycoprotein, central and dimerisation domain superfamily | Homologous Superfamily |