Annotations: 6IP2

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth B]	SCOP2B Superfamily	RecA-like P-loop NTPases	8044318	3002019	SCOP2B (2021-05-27)
B [auth C]	SCOP2B Superfamily	RecA-like P-loop NTPases	8044318	3002019	SCOP2B (2021-05-27)
C [auth D]	SCOP2B Superfamily	RecA-like P-loop NTPases	8044318	3002019	SCOP2B (2021-05-27)
D [auth E]	SCOP2B Superfamily	RecA-like P-loop NTPases	8044318	3002019	SCOP2B (2021-05-27)
E [auth F]	SCOP2B Superfamily	RecA-like P-loop NTPases	8044318	3002019	SCOP2B (2021-05-27)
F [auth A]	SCOP2B Superfamily	RecA-like P-loop NTPases	8044318	3002019	SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth B]	PF17862	e6ip2B3	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: PF17862	ECOD (1.6)
A [auth B]	PF21964	e6ip2B4	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: PF21964	ECOD (1.6)
A [auth B]	PF00004	e6ip2B1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00004	ECOD (1.6)
B [auth C]	PF17862	e6ip2C2	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: PF17862	ECOD (1.6)
B [auth C]	PF21964	e6ip2C3	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: PF21964	ECOD (1.6)
B [auth C]	PF00004	e6ip2C4	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00004	ECOD (1.6)
C [auth D]	PF17862	e6ip2D3	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: PF17862	ECOD (1.6)
C [auth D]	PF21964	e6ip2D1	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: PF21964	ECOD (1.6)
C [auth D]	PF00004	e6ip2D4	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00004	ECOD (1.6)
D [auth E]	PF17862	e6ip2E1	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: PF17862	ECOD (1.6)
D [auth E]	PF21964	e6ip2E2	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: PF21964	ECOD (1.6)
D [auth E]	PF00004	e6ip2E4	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00004	ECOD (1.6)
E [auth F]	PF17862	e6ip2F3	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: PF17862	ECOD (1.6)
E [auth F]	PF21964	e6ip2F1	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: PF21964	ECOD (1.6)
E [auth F]	PF00004	e6ip2F4	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00004	ECOD (1.6)
F [auth A]	PF17862	e6ip2A2	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: PF17862	ECOD (1.6)
F [auth A]	PF21964	e6ip2A3	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: PF21964	ECOD (1.6)
F [auth A]	PF00004	e6ip2A1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00004	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], F [auth A]	PF17862	AAA+ lid domain (AAA_lid_3)	AAA+ lid domain	This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains.	Domain
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], F [auth A]	PF00004	ATPase family associated with various cellular activities (AAA) (AAA)	ATPase family associated with various cellular activities (AAA)	AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2].	Domain
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], F [auth A]	PF21964	NSF, AAA+ ATPase lid domain (NSF_ATPase_lid)	NSF, AAA+ ATPase lid domain	This entry represents the ATPase lid domain of the second AAA+ ATP-binding domain (also known as D2) of NSF proteins [1], found at the C-terminal. NFS proteins are essential membrane fusion events. They play the role of a chaperone by activating SNAP ...	This entry represents the ATPase lid domain of the second AAA+ ATP-binding domain (also known as D2) of NSF proteins [1], found at the C-terminal. NFS proteins are essential membrane fusion events. They play the role of a chaperone by activating SNAP receptor proteins (SNAREs) so that they can participate in membrane fusion [1-5].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], F [auth A]	Vesicle-fusing ATPase	syntaxin-1 binding protein binding binding SNARE binding syntaxin binding PDZ domain binding protein domain specific binding protein-containing complex destabilizing activity ATP-dependent protein disaggregase activity ATP-dependent activity ionotropic glutamate receptor binding signaling receptor binding glutamate receptor binding adenyl ribonucleotide binding syntaxin-1 binding protein binding binding SNARE binding syntaxin binding PDZ domain binding protein domain specific binding protein-containing complex destabilizing activity ATP-dependent protein disaggregase activity ATP-dependent activity ionotropic glutamate receptor binding signaling receptor binding glutamate receptor binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding kinase binding enzyme binding protein kinase binding protein-containing complex binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity cation binding metal ion binding identical protein binding	protein localization Golgi to plasma membrane transport establishment of protein localization cellular localization nitrogen compound transport post-Golgi vesicle-mediated transport transport establishment of protein localization to plasma membrane Golgi to plasma membrane protein transport vesicle-mediated transport localization cellular macromolecule localization protein localization to cell periphery establishment of protein localization to membrane protein localization Golgi to plasma membrane transport establishment of protein localization cellular localization nitrogen compound transport post-Golgi vesicle-mediated transport transport establishment of protein localization to plasma membrane Golgi to plasma membrane protein transport vesicle-mediated transport localization cellular macromolecule localization protein localization to cell periphery establishment of protein localization to membrane protein localization to plasma membrane localization within membrane protein localization to membrane establishment of localization vesicle-mediated transport to the plasma membrane protein transport macromolecule localization cellular process Golgi vesicle transport catabolic process positive regulation of protein metabolic process positive regulation of biological process macromolecule catabolic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of macromolecule metabolic process protein metabolic process organonitrogen compound catabolic process regulation of biological process organonitrogen compound metabolic process regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process protein catabolic process regulation of catabolic process positive regulation of protein catabolic process positive regulation of catabolic process metabolic process macromolecule metabolic process regulation of metabolic process regulation of protein catabolic process intra-Golgi vesicle-mediated transport regulation of signaling signaling regulation of receptor recycling receptor recycling receptor metabolic process positive regulation of receptor recycling positive regulation of signaling monoatomic ion transport potassium ion transport monoatomic cation transport metal ion transport intracellular transport establishment of localization in cell intracellular protein transport cellular component disassembly protein-containing complex organization SNARE complex disassembly protein-containing complex disassembly cellular component organization cellular component organization or biogenesis	midbody cellular anatomical entity membrane-bounded organelle intracellular anatomical structure Golgi apparatus subcompartment Golgi apparatus organelle subcompartment intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle Golgi stack cytoplasm cytosol midbody cellular anatomical entity membrane-bounded organelle intracellular anatomical structure Golgi apparatus subcompartment Golgi apparatus organelle subcompartment intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle Golgi stack cytoplasm cytosol cell periphery plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], F [auth A]	IPR004201	CDC48, domain 2	Domain
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], F [auth A]	IPR009010	Aspartate decarboxylase-like domain superfamily	Homologous Superfamily
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], F [auth A]	IPR003593	AAA+ ATPase domain	Domain
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], F [auth A]	IPR003959	ATPase, AAA-type, core	Domain
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], F [auth A]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], F [auth A]	IPR029067	CDC48 domain 2-like superfamily	Homologous Superfamily
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], F [auth A]	IPR041569	AAA ATPase, AAA+ lid domain	Domain
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], F [auth A]	IPR039812	Vesicle-fusing ATPase	Family
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], F [auth A]	IPR003960	ATPase, AAA-type, conserved site	Conserved Site
A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], A [auth B], B [auth C], C [auth D], D [auth E], E [auth F], F [auth A]	IPR003338	CDC48, N-terminal subdomain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.