6IBG

Bacteriophage G20c portal protein crystal structure for construct with intact N-terminus


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF21919e6ibgA2 A: beta barrelsX: Barrel domain in upper collar protein (From Topology)H: Barrel domain in upper collar protein (From Topology)T: Barrel domain in upper collar proteinF: PF21919ECOD (1.6)
AF_UNCLASSIFIEDe6ibgA1 A: alpha bundlesX: Alpha-helical domain in upper collar protein (From Topology)H: Alpha-helical domain in upper collar protein (From Topology)T: Alpha-helical domain in upper collar proteinF: F_UNCLASSIFIEDECOD (1.6)
BPF21919e6ibgB1 A: beta barrelsX: Barrel domain in upper collar protein (From Topology)H: Barrel domain in upper collar protein (From Topology)T: Barrel domain in upper collar proteinF: PF21919ECOD (1.6)
BF_UNCLASSIFIEDe6ibgB2 A: alpha bundlesX: Alpha-helical domain in upper collar protein (From Topology)H: Alpha-helical domain in upper collar protein (From Topology)T: Alpha-helical domain in upper collar proteinF: F_UNCLASSIFIEDECOD (1.6)
CPF21919e6ibgC2 A: beta barrelsX: Barrel domain in upper collar protein (From Topology)H: Barrel domain in upper collar protein (From Topology)T: Barrel domain in upper collar proteinF: PF21919ECOD (1.6)
CF_UNCLASSIFIEDe6ibgC1 A: alpha bundlesX: Alpha-helical domain in upper collar protein (From Topology)H: Alpha-helical domain in upper collar protein (From Topology)T: Alpha-helical domain in upper collar proteinF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF21919Barrel domain in phage portal protein (P23-45_portal_barrel)Barrel domain in phage portal proteinThis entry represents a beta barrel domain found in the Thermus phage P23-45 portal protein. The portal protein is a key component of many double-stranded DNA viruses, governing capsid assembly and genome packaging. Twelve subunits of the portal prot ...This entry represents a beta barrel domain found in the Thermus phage P23-45 portal protein. The portal protein is a key component of many double-stranded DNA viruses, governing capsid assembly and genome packaging. Twelve subunits of the portal protein define a tunnel, through which DNA is translocated into the capsid.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Portal protein- -