6IB8
Structure of a complex of SuhB and NusA AR2 domain
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d6ib8b1 | Multi-domain proteins (alpha and beta) | Carbohydrate phosphatase | Carbohydrate phosphatase | automated matches | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
B | d6ib8b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d6ib8a_ | Multi-domain proteins (alpha and beta) | Carbohydrate phosphatase | Carbohydrate phosphatase | automated matches | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF00459 | e6ib8B2 | A: a+b two layers | X: a+b domain in carbohydrate phosphatases (From Topology) | H: a+b domain in carbohydrate phosphatases (From Topology) | T: a+b domain in carbohydrate phosphatases | F: PF00459 | ECOD (1.6) |
B | PF00459 | e6ib8B1 | A: a/b three-layered sandwiches | X: Rossmann-like domain in carbohydrate phosphatases (From Homology) | H: Rossmann-like domain in carbohydrate phosphatases | T: Rossmann-like domain in carbohydrate phosphatases | F: PF00459 | ECOD (1.6) |
A | PF00459 | e6ib8A2 | A: a+b two layers | X: a+b domain in carbohydrate phosphatases (From Topology) | H: a+b domain in carbohydrate phosphatases (From Topology) | T: a+b domain in carbohydrate phosphatases | F: PF00459 | ECOD (1.6) |
A | PF00459 | e6ib8A1 | A: a/b three-layered sandwiches | X: Rossmann-like domain in carbohydrate phosphatases (From Homology) | H: Rossmann-like domain in carbohydrate phosphatases | T: Rossmann-like domain in carbohydrate phosphatases | F: PF00459 | ECOD (1.6) |
C | PF14520 | e6ib8C1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF14520 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.30.540.10 | Alpha Beta | 2-Layer Sandwich | Fructose-1,6-Bisphosphatase | Chain A, domain 1 | CATH (utative) |
B | 3.40.190.80 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (utative) |
A | 3.30.540.10 | Alpha Beta | 2-Layer Sandwich | Fructose-1,6-Bisphosphatase | Chain A, domain 1 | CATH (utative) |
A | 3.40.190.80 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (utative) |
C | 1.10.150.20 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00459 | Inositol monophosphatase family (Inositol_P) | Inositol monophosphatase family | - | Family | |
PF14520 | Helix-hairpin-helix domain (HHH_5) | Helix-hairpin-helix domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR033942 | Inositol monophosphatase | Family | |
IPR022337 | Inositol monophosphatase SuhB-like | Family | |
IPR020550 | Inositol monophosphatase, conserved site | Conserved Site | |
IPR020583 | Inositol monophosphatase, metal-binding site | Binding Site | |
IPR000760 | Inositol monophosphatase-like | Family | |
IPR025249 | KH domain, NusA-like | Domain | |
IPR036555 | NusA, N-terminal domain superfamily | Homologous Superfamily | |
IPR003029 | S1 domain | Domain | |
IPR013735 | Transcription factor NusA, N-terminal | Domain | |
IPR030842 | Transcription termination/antitermination protein NusA, bacterial | Family | |
IPR010213 | Transcription termination factor NusA | Domain | |
IPR009019 | K homology domain superfamily, prokaryotic type | Homologous Superfamily | |
IPR010214 | Transcription termination factor NusA, C-terminal duplication | Repeat | |
IPR015946 | K homology domain-like, alpha/beta | Homologous Superfamily | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR010995 | DNA repair Rad51/transcription factor NusA, alpha-helical | Homologous Superfamily |