6I60
Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF05592 | e6i60A5 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF05592 | ECOD (1.6) |
A | PF08531 | e6i60A4 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF08531 | ECOD (1.6) |
A | F_UNCLASSIFIED | e6i60A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF17390 | e6i60A3 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycoside hydrolase family 127 middle domain-related (From Topology) | T: Glycoside hydrolase family 127 middle domain-related | F: PF17390 | ECOD (1.6) |
A | PF17389 | e6i60A2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: PF17389 | ECOD (1.6) |
B | PF05592 | e6i60B4 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF05592 | ECOD (1.6) |
B | PF08531 | e6i60B3 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF08531 | ECOD (1.6) |
B | F_UNCLASSIFIED | e6i60B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF17390 | e6i60B2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycoside hydrolase family 127 middle domain-related (From Topology) | T: Glycoside hydrolase family 127 middle domain-related | F: PF17390 | ECOD (1.6) |
B | PF17389 | e6i60B5 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: PF17389 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05592 | Bacterial alpha-L-rhamnosidase concanavalin-like domain (Bac_rhamnosid) | Bacterial alpha-L-rhamnosidase concanavalin-like domain | This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are impo ... | Domain | |
PF08531 | Alpha-L-rhamnosidase N-terminal domain (Bac_rhamnosid_N) | Alpha-L-rhamnosidase N-terminal domain | This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition. | Domain | |
PF17389 | Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain (Bac_rhamnosid6H) | Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain | - | Repeat | |
PF17390 | Bacterial alpha-L-rhamnosidase C-terminal domain (Bac_rhamnosid_C) | Bacterial alpha-L-rhamnosidase C-terminal domain | This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are impo ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Alpha-rhamnosidase | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012341 | Six-hairpin glycosidase-like superfamily | Homologous Superfamily | |
IPR016007 | Alpha-L-rhamnosidase | Family | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR035398 | Alpha-L-rhamnosidase C-terminal domain | Domain | |
IPR035396 | Alpha-L-rhamnosidase, six-hairpin glycosidase domain | Domain | |
IPR008928 | Six-hairpin glycosidase superfamily | Homologous Superfamily | |
IPR013737 | Bacterial alpha-L-rhamnosidase N-terminal | Domain | |
IPR008902 | Alpha-L-rhamnosidase, concanavalin-like domain | Domain |