6GZJ

Complex between the dynein light chain DYNLL1/DLC8 and the specific domain of large myelin-associated glycoprotein L-MAG

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	DLC-like	8034979	3000821	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Dynein_light	e6gzjA1	A: a+b two layers	X: DLC (From Topology)	H: DLC (From Topology)	T: DLC	F: Dynein_light	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.740.10	Alpha Beta	2-Layer Sandwich	Protein Inhibitor Of Neuronal Nitric Oxide Synthase	Protein Inhibitor Of Neuronal Nitric Oxide Synthase	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01221	Dynein light chain type 1 (Dynein_light)	Dynein light chain type 1	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Dynein light chain 1, cytoplasmic	nitric-oxide synthase inhibitor activity enzyme regulator activity molecular function inhibitor activity molecular function regulator activity enzyme inhibitor activity nitric-oxide synthase regulator activity nuclease inhibitor activity deoxyribonuclease inhibitor activity scaffold protein binding protein binding binding protein-containing complex binding dynein intermediate chain binding enzyme binding nitric-oxide synthase inhibitor activity enzyme regulator activity molecular function inhibitor activity molecular function regulator activity enzyme inhibitor activity nitric-oxide synthase regulator activity nuclease inhibitor activity deoxyribonuclease inhibitor activity scaffold protein binding protein binding binding protein-containing complex binding dynein intermediate chain binding enzyme binding identical protein binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process organelle assembly plasma membrane bounded cell projection organization motile cilium assembly cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process organelle assembly plasma membrane bounded cell projection organization motile cilium assembly cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular component assembly cilium assembly cellular component organization or biogenesis cilium organization cell projection assembly apoptotic process cell death programmed cell death DNA-templated DNA replication maintenance of fidelity negative regulation of biological process regulation of primary metabolic process nucleobase-containing compound metabolic process negative regulation of DNA-templated DNA replication regulation of DNA strand resection involved in replication fork processing DNA strand resection involved in replication fork processing negative regulation of nucleobase-containing compound metabolic process negative regulation of DNA strand resection involved in replication fork processing regulation of nucleobase-containing compound metabolic process negative regulation of macromolecule metabolic process DNA-templated DNA replication regulation of biological process negative regulation of DNA replication negative regulation of metabolic process biological regulation primary metabolic process DNA metabolic process regulation of macromolecule metabolic process nucleic acid metabolic process DNA replication regulation of DNA-templated DNA replication metabolic process negative regulation of DNA metabolic process macromolecule metabolic process regulation of metabolic process replication fork processing regulation of DNA metabolic process regulation of DNA replication regulation of biosynthetic process regulation of nitric oxide biosynthetic process negative regulation of nitric oxide metabolic process reactive nitrogen species metabolic process nitric oxide metabolic process nitric oxide biosynthetic process biosynthetic process negative regulation of nitric oxide biosynthetic process negative regulation of biosynthetic process regulation of nitric oxide metabolic process cellular localization transport intracellular transport intraciliary retrograde transport establishment of localization protein-containing complex localization localization establishment of localization in cell microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process intraciliary transport regulation of cellular process phosphorylation cellular metabolic process negative regulation of phosphate metabolic process regulation of cellular metabolic process negative regulation of cellular metabolic process regulation of phosphate metabolic process phosphate-containing compound metabolic process negative regulation of phosphorus metabolic process negative regulation of cellular process regulation of phosphorus metabolic process regulation of phosphorylation negative regulation of phosphorylation phosphorus metabolic process developmental process spermatid development spermatid differentiation sexual reproduction cellular developmental process spermatogenesis reproductive process multicellular organismal reproductive process cell development cellular process involved in reproduction in multicellular organism developmental process involved in reproduction gamete generation male gamete generation cell differentiation anatomical structure development germ cell development protein localization positive regulation of cell communication regulation of localization establishment of protein localization nitrogen compound transport positive regulation of establishment of protein localization cell communication carbohydrate homeostasis cellular macromolecule localization positive regulation of insulin secretion involved in cellular response to glucose stimulus positive regulation of insulin secretion regulation of biological quality regulation of peptide hormone secretion regulation of hormone levels positive regulation of peptide hormone secretion establishment of protein localization to extracellular region intracellular glucose homeostasis protein secretion cellular response to oxygen-containing compound regulation of protein secretion regulation of secretion cellular response to carbohydrate stimulus chemical homeostasis response to glucose response to chemical glucose homeostasis positive regulation of protein localization insulin secretion involved in cellular response to glucose stimulus regulation of hormone secretion regulation of protein localization regulation of peptide secretion signaling homeostatic process positive regulation of biological process positive regulation of secretion by cell hormone secretion protein localization to extracellular region positive regulation of protein transport peptide secretion secretion by cell regulation of secretion by cell positive regulation of hormone secretion response to monosaccharide response to carbohydrate positive regulation of secretion amide transport signal release cellular response to hexose stimulus intracellular chemical homeostasis cellular response to monosaccharide stimulus positive regulation of cellular process positive regulation of peptide secretion regulation of signaling secretion regulation of transport regulation of peptide transport regulation of establishment of protein localization cell-cell signaling export from cell response to oxygen-containing compound cellular response to glucose stimulus regulation of protein transport positive regulation of protein secretion peptide transport response to hexose cellular response to chemical stimulus cellular homeostasis positive regulation of transport protein transport regulation of cellular localization regulation of insulin secretion peptide hormone secretion macromolecule localization regulation of insulin secretion involved in cellular response to glucose stimulus hormone transport regulation of cell communication insulin secretion positive regulation of signaling multicellular organismal process head development animal organ development brain development nervous system development substantia nigra development multicellular organism development central nervous system development midbrain development neural nucleus development system development	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle cell projection cilium plasma membrane bounded cell projection tertiary granule membrane membrane intracellular vesicle membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle cell projection cilium plasma membrane bounded cell projection tertiary granule membrane membrane intracellular vesicle endomembrane system tertiary granule cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle secretory granule secretory vesicle vesicle organelle membrane secretory granule membrane centrosome microtubule organizing center cytoskeleton intracellular non-membrane-bounded organelle microtubule cytoskeleton non-membrane-bounded organelle cytosol ciliary tip cell periphery plasma membrane mitotic spindle spindle chromosome chromosomal region kinetochore chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome ficolin-1-rich granule membrane ficolin-1-rich granule site of double-strand break site of DNA damage protein-containing complex cytoplasmic dynein complex catalytic complex dynein complex microtubule associated complex polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer nucleus neuron projection cytoplasm axon axon cytoplasm neuron projection cytoplasmic region plasma membrane bounded cell projection cytoplasm
B	Myelin-associated glycoprotein	sialic acid binding organic acid binding binding ion binding anion binding carboxylic acid binding carbohydrate derivative binding small molecule binding protein binding signaling receptor binding ganglioside GT1b binding amide binding ceramide binding sphingolipid binding sialic acid binding organic acid binding binding ion binding anion binding carboxylic acid binding carbohydrate derivative binding small molecule binding protein binding signaling receptor binding ganglioside GT1b binding amide binding ceramide binding sphingolipid binding glycolipid binding glycosphingolipid binding ganglioside binding lipid binding carbohydrate binding identical protein binding protein homodimerization activity protein dimerization activity kinase binding enzyme binding protein kinase binding	cell adhesion cell-cell adhesion cellular process cell-cell adhesion via plasma-membrane adhesion molecules multicellular organismal process cellular developmental process cellular component assembly involved in morphogenesis cell development glial cell development myelin assembly cellular component organization cellular component biogenesis multicellular organism development neurogenesis cell adhesion cell-cell adhesion cellular process cell-cell adhesion via plasma-membrane adhesion molecules multicellular organismal process cellular developmental process cellular component assembly involved in morphogenesis cell development glial cell development myelin assembly cellular component organization cellular component biogenesis multicellular organism development neurogenesis cellular anatomical entity morphogenesis cellular component assembly gliogenesis axon ensheathment ensheathment of neurons cell differentiation anatomical structure development cellular component organization or biogenesis system development developmental process oligodendrocyte development central nervous system myelination nervous system development central nervous system myelin formation myelination anatomical structure morphogenesis axon ensheathment in central nervous system central nervous system development oligodendrocyte differentiation glial cell differentiation anatomical structure formation involved in morphogenesis regulation of cellular process regulation of developmental process negative regulation of biological process regulation of cell differentiation neuron differentiation negative regulation of cellular process negative regulation of cell differentiation regulation of biological process negative regulation of developmental process biological regulation generation of neurons negative regulation of neuron differentiation regulation of neuron differentiation axon extension regulation of growth axonogenesis regulation of cellular component size developmental growth cell projection organization regulation of neurogenesis neuron projection development regulation of cell development cell projection morphogenesis negative regulation of growth neuron projection morphogenesis regulation of biological quality negative regulation of cellular component organization regulation of cell projection organization negative regulation of cell growth developmental growth involved in morphogenesis negative regulation of axonogenesis negative regulation of developmental growth negative regulation of multicellular organismal process regulation of neuron projection development regulation of cellular component organization plasma membrane bounded cell projection morphogenesis cell growth cell morphogenesis regulation of axon extension regulation of nervous system development negative regulation of neurogenesis regulation of extent of cell growth regulation of axonogenesis negative regulation of nervous system development regulation of multicellular organismal process negative regulation of cell projection organization regulation of anatomical structure morphogenesis regulation of cell size neuron projection extension regulation of multicellular organismal development regulation of developmental growth plasma membrane bounded cell projection organization developmental cell growth growth negative regulation of axon extension axon development regulation of cell growth cell morphogenesis involved in neuron differentiation negative regulation of neuron projection development negative regulation of cell development neuron development regulation of plasma membrane bounded cell projection organization regulation of anatomical structure size neuron apoptotic process negative regulation of neuron apoptotic process negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process apoptotic process programmed cell death regulation of neuron apoptotic process system process regulation of myelination regulation of system process positive regulation of biological process positive regulation of myelination positive regulation of nervous system process positive regulation of cellular process nervous system process regulation of nervous system process positive regulation of multicellular organismal process transmission of nerve impulse cell communication cellular response to stimulus response to stimulus response to mechanical stimulus response to external stimulus response to abiotic stimulus cellular response to mechanical stimulus cellular response to abiotic stimulus cellular response to external stimulus cellular response to environmental stimulus regeneration response to axon injury neuron projection regeneration axon regeneration cellular response to stress response to stress response to wounding positive regulation of nervous system development astrocyte differentiation regulation of gliogenesis regulation of astrocyte differentiation positive regulation of gliogenesis positive regulation of developmental process positive regulation of cell differentiation positive regulation of neurogenesis positive regulation of astrocyte differentiation positive regulation of cell development regulation of glial cell differentiation positive regulation of glial cell differentiation	myelin sheath cellular anatomical entity axon cell projection paranode region of axon main axon neuron projection plasma membrane bounded cell projection myelin sheath adaxonal region cell periphery plasma membrane membrane membrane microdomain membrane raft myelin sheath cellular anatomical entity axon cell projection paranode region of axon main axon neuron projection plasma membrane bounded cell projection myelin sheath adaxonal region cell periphery plasma membrane membrane membrane microdomain membrane raft mesaxon ensheathing process compact myelin Schmidt-Lanterman incisure

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR037177	Dynein light chain superfamily	Homologous Superfamily
A	IPR019763	Dynein light chain, type 1/2, conserved site	Conserved Site
A	IPR001372	Dynein light chain, type 1/2	Family
B	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
B	IPR003598	Immunoglobulin subtype 2	Domain
B	IPR003599	Immunoglobulin domain subtype	Domain
B	IPR051036	Sialic acid-binding Ig-like lectin	Family
B	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
B	IPR013162	CD80-like, immunoglobulin C2-set	Domain
B	IPR007110	Immunoglobulin-like domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P63167	brain ischemia acute myeloid leukemia breast cancer Emery-Dreifuss muscular dystrophy lung cancer ovarian cancer Becker muscular dystrophy Cerebral Ischemia hepatocellular carcinoma lymphoplasmacytic lymphoma plasma cell myeloma Duchenne muscular dystrophy juvenile dermatomyositis myopathy tuberculosis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.