6GZ3

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
H [auth BK]SCOP2B SuperfamilyWinged helix DNA-binding domain 8055720 3000034 SCOP2B (2022-06-29)
I [auth BM]SCOP2B SuperfamilyL30e-like 8063980 3001739 SCOP2B (2022-06-29)
P [auth BZ]SCOP2B SuperfamilyWinged helix DNA-binding domain 8090991 3000034 SCOP2B (2022-06-29)
XA [auth AJ]SCOP2B SuperfamilyRL5-like 8073894 3001709 SCOP2B (2022-06-29)
LB [auth AY]SCOP2 FamilyRibosomal proteins L24p and L21e 8076753 4001752 SCOP2 (2022-06-29)
LB [auth AY]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076754 3000334 SCOP2 (2022-06-29)
CC [auth Ap]SCOP2B SuperfamilyZn-binding ribosomal proteins 8101435 3001320 SCOP2B (2022-06-29)
M [auth BS]SCOP2B SuperfamilyS13-like H2TH domain 8101439 3000053 SCOP2B (2022-06-29)
Q [auth Bc]SCOP2B SuperfamilyNucleic acid-binding proteins 8095265 3000135 SCOP2B (2022-06-29)
R [auth Bd]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052584 3000068 SCOP2B (2022-06-29)
V [auth BB]SCOP2B SuperfamilyRibosomal S3Ae-like 8053216 3002166 SCOP2B (2022-06-29)
CA [auth BL]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052708 3002138 SCOP2B (2022-06-29)
CA [auth BL]SCOP2B SuperfamilyNucleic acid-binding proteins 8052707 3000135 SCOP2B (2022-06-29)
DA [auth BN]SCOP2B SuperfamilyHomeodomain-like 8052970 3000001 SCOP2B (2022-06-29)
DA [auth BN]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052971 3001284 SCOP2B (2022-06-29)
GA [auth BW]SCOP2B SuperfamilyRibosomal protein S8 8079081 3000709 SCOP2B (2022-06-29)
WA [auth AI]SCOP2 FamilyRibosomal protein L10e 8097319 4001135 SCOP2 (2022-06-29)
WA [auth AI]SCOP2 SuperfamilyRibosomal protein L16p/L10e 8097320 3000884 SCOP2 (2022-06-29)
AB [auth AN]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082477 3000210 SCOP2B (2022-06-29)
IB [auth AV]SCOP2B Superfamily50S Ribosomal protein L14-like 8072048 3000433 SCOP2B (2022-06-29)
MB [auth AZ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053047 3000334 SCOP2B (2022-06-29)
G [auth BF]SCOP2B SuperfamilyRibosomal protein S7 8066001 3000799 SCOP2B (2022-06-29)
RB [auth Ae]SCOP2 FamilyRibosomal protein L32e 8102087 4003517 SCOP2 (2022-06-29)
RB [auth Ae]SCOP2 SuperfamilyRibosomal protein L32e 8102088 3000982 SCOP2 (2022-06-29)
YB [auth Al]SCOP2B SuperfamilyRibosomal protein L39e 8095595 3001756 SCOP2B (2022-06-29)
EC [auth Au]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like 8065344 3001911 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
H [auth BK]S10_plectine6gz3BK1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
I [auth BM]Ribosomal_L7Aee6gz3BM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
K [auth BQ]Ribosomal_S9e6gz3BQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
N [auth BT]Ribosomal_S19ee6gz3BT1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
O [auth BU]Ribosomal_S10_1e6gz3BU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
P [auth BZ]Ribosomal_S25e6gz3BZ1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
S [auth Bf]Ribosomal_S27e6gz3Bf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
T [auth Bg]DUF1899e6gz3Bg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: DUF1899ECOD (1.6)
X [auth BE]Ribosomal_S4ee6gz3BE2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
X [auth BE]40S_S4_Ce6gz3BE1 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
X [auth BE]RS4NTe6gz3BE3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
Y [auth BG]Ribosomal_S6ee6gz3BG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
EA [auth BO]Ribosomal_S11e6gz3BO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
IA [auth BY]Ribosomal_S24ee6gz3BY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
LA [auth Be]Ribosomal_S30e6gz3Be1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
SA [auth AE]Ribosomal_L6ee6gz3AE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
UA [auth AG]Ribosomal_L7Ae_1e6gz3AG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
XA [auth AJ]Ribosomal_L5_Ce6gz3AJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
FB [auth AS]Ribosomal_L18Ae6gz3AS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
HB [auth AU]Ribosomal_L22ee6gz3AU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
KB [auth AX]Ribosomal_L23_3e6gz3AX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
LB [auth AY]Ribosomal_L26e6gz3AY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
UB [auth Ah]Ribosomal_L29_2e6gz3Ah1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
BC [auth Ao]Ribosomal_L44e6gz3Ao1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
CC [auth Ap]Ribosomal_L37aee6gz3Ap1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
DC [auth At]Ribosomal_L28ee6gz3At1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: Ribosomal_L28eECOD (1.6)
J [auth BP]Ribosomal_S19e6gz3BP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
L [auth BR]Ribosomal_S17ee6gz3BR1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
M [auth BS]Ribosomal_S13e6gz3BS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
Q [auth Bc]Ribosomal_S28ee6gz3Bc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
R [auth Bd]Ribosomal_S14_2e6gz3Bd1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
U [auth BA]Ribosomal_S2_2e6gz3BA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
V [auth BB]Ribosomal_S3Ae_Ne6gz3BB2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
V [auth BB]Ribosomal_S3Ae_Ce6gz3BB1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
W [auth BC]Ribosomal_S5_C_1e6gz3BC1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
W [auth BC]Ribosomal_S5_3e6gz3BC3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
W [auth BC]Ribosomal_S5_2e6gz3BC2 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
Z [auth BH]Ribosomal_S7e_Ne6gz3BH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
Z [auth BH]Ribosomal_S7e_C_1e6gz3BH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_1ECOD (1.6)
AA [auth BI]Ribosomal_S8ee6gz3BI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
BA [auth BJ]S4e6gz3BJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
CA [auth BL]Ribosomal_S17_1e6gz3BL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
DA [auth BN]Ribosomal_S13_Ne6gz3BN2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
DA [auth BN]Ribosomal_S15_2e6gz3BN1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
FA [auth BV]Ribosomal_S21ee6gz3BV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
GA [auth BW]Ribosomal_S8_N_1e6gz3BW1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
GA [auth BW]Ribosomal_S8_C_1e6gz3BW2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
HA [auth BX]Ribosom_S12_S23e6gz3BX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
JA [auth Ba]Ribosomal_S26ee6gz3Ba1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
KA [auth Bb]Ribosomal_S27ee6gz3Bb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
OA [auth AA]Ribosomal_L2_1e6gz3AA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
OA [auth AA]Ribosomal_L2_C_2e6gz3AA2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
PA [auth AB]Ribosomal_L3e6gz3AB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
QA [auth AC]Ribosomal_L4e6gz3AC2 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
QA [auth AC]Ribos_L4_asso_Ce6gz3AC1 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
RA [auth AD]Ribosomal_L5ee6gz3AD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
TA [auth AF]Ribosomal_L30_1e6gz3AF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
VA [auth AH]Ribosomal_L6_2e6gz3AH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
VA [auth AH]Ribosomal_L6e6gz3AH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
WA [auth AI]Ribosomal_L16e6gz3AI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
YA [auth AL]Ribosomal_L13ee6gz3AL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
ZA [auth AM]Ribosomal_L14ee6gz3AM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
AB [auth AN]Ribosomal_L15ee6gz3AN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
BB [auth AO]Ribosomal_L13e6gz3AO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
CB [auth AP]Ribosomal_L22e6gz3AP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
DB [auth AQ]Ribosomal_L18e6gz3AQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
EB [auth AR]Ribosomal_L19e_Ne6gz3AR1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
EB [auth AR]Ribosomal_L19e_Ce6gz3AR2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
GB [auth AT]Ribosomal_L21ee6gz3AT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
F [auth BD]Ribosomal_S3_Ce6gz3BD2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
F [auth BD]KH_2_3e6gz3BD1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
IB [auth AV]Ribosomal_L14e6gz3AV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
JB [auth AW]Ribosomal_L24ee6gz3AW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
MB [auth AZ]Ribosomal_L27ee6gz3AZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
NB [auth Aa]Ribosomal_L18e6gz3Aa1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
OB [auth Ab]Ribosomal_L29ee6gz3Ab1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
PB [auth Ac]Ribosomal_L7Aee6gz3Ac1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
QB [auth Ad]Ribosomal_L31ee6gz3Ad1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
G [auth BF]Ribosomal_S7_1e6gz3BF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
RB [auth Ae]Ribosomal_L32ee6gz3Ae1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
SB [auth Af]Ribosomal_L35Aee6gz3Af1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
TB [auth Ag]Ribosomal_L34ee6gz3Ag1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
VB [auth Ai]Ribosomal_L36ee6gz3Ai1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
WB [auth Aj]Ribosomal_L37ee6gz3Aj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
XB [auth Ak]Ribosomal_L38ee6gz3Ak1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
YB [auth Al]Ribosomal_L39e6gz3Al1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
ZB [auth Am]Ribosomal_L40ee6gz3Am1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
AC [auth An]Ribosomal_L41e6gz3An1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
EC [auth Au]Ribosomal_L1_2nd_1e6gz3Au1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
EC [auth Au]Ribosomal_L1_1st_1e6gz3Au2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1st_1ECOD (1.6)
FC [auth Aq]Ribosomal_L11e6gz3Aq2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
FC [auth Aq]Ribosomal_L11_Ne6gz3Aq1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
GC [auth AK]Ribosomal_L10e6gz3AK2 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
GC [auth AK]Ribosomal_P0_L10ee6gz3AK1 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: Ribosomal_P0_L10eECOD (1.6)
HC [auth Ct]GTP_EFTU_D2e6gz3Ct2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2ECOD (1.6)
HC [auth Ct]EFG_IVe6gz3Ct4 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: EFG_IVECOD (1.6)
HC [auth Ct]EFG_Ce6gz3Ct5 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_CECOD (1.6)
HC [auth Ct]EFG_IIe6gz3Ct1 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_IIECOD (1.6)
HC [auth Ct]MnmE_helical_2nde6gz3Ct3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
H [auth BK]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
I [auth BM]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
P [auth BZ]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
Y [auth BG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
Y [auth BG]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
XA [auth AJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
XA [auth AJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
HB [auth AU]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
LB [auth AY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
LB [auth AY]PF00467KOW motif (KOW)KOW motif- Family
L [auth BR]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
M [auth BS]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
V [auth BB]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
BA [auth BJ]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
BA [auth BJ]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
CA [auth BL]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
CA [auth BL]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
DA [auth BN]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
DA [auth BN]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
GA [auth BW]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
HA [auth BX]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
OA [auth AA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
OA [auth AA]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
RA [auth AD]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
WA [auth AI]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
YA [auth AL]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
AB [auth AN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
BB [auth AO]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
CB [auth AP]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
DB [auth AQ]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
DB [auth AQ]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
GB [auth AT]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
F [auth BD]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
IB [auth AV]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
JB [auth AW]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
MB [auth AZ]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
MB [auth AZ]PF00467KOW motif (KOW)KOW motif- Family
G [auth BF]PF00240Ubiquitin family (ubiquitin)Ubiquitin familyThis family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ...This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5].
Domain
G [auth BF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
G [auth BF]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth A2]28S ribosomal RNA---
H [auth BK]ribosomal protein eS10 -
I [auth BM]40S ribosomal protein S12
K [auth BQ]ribosomal protein uS9---
N [auth BT]ribosomal protein eS19---
O [auth BU]ribosomal protein uS10---
P [auth BZ]ribosomal protein eS25
S [auth Bf]Ribosomal protein S27a
T [auth Bg]ribosomal protein RACK 1
X [auth BE]ribosomal protein eS4---
Y [auth BG]40S ribosomal protein S6
EA [auth BO]ribosomal protein uS11---
IA [auth BY]ribosomal protein eS24---
LA [auth Be]ribosomal protein eS30---
NA [auth A4]5S ribosomal RNA---
SA [auth AE]ribosomal protein eL6---
UA [auth AG]ribosomal protein eL8---
XA [auth AJ]Ribosomal protein L11
FB [auth AS]ribosomal protein eL20---
HB [auth AU]ribosomal protein eL22---
KB [auth AX]ribosomal protein uL23---
LB [auth AY]Ribosomal protein L26
UB [auth Ah]ribosomal protein uL29---
BC [auth Ao]ribosomal protein eL42
CC [auth Ap]ribosomal protein eL43
DC [auth At]ribosomal protein eL28---
J [auth BP]ribosomal protein uS19---
L [auth BR]ribosomal protein eS17
M [auth BS]ribosomal protein uS13
Q [auth Bc]Ribosomal protein S28
R [auth Bd]ribosomal protein uS14
B [auth Bv]ap/P-site tRNA---
U [auth BA]ribosomal protein uS2---
V [auth BB]40S ribosomal protein S3a
W [auth BC]ribosomal protein uS5---
Z [auth BH]40S ribosomal protein S7
AA [auth BI]ribosomal protein eS8---
BA [auth BJ]Ribosomal protein S9 (Predicted)
CA [auth BL]Ribosomal protein S11
C [auth Bx]mRNA---
DA [auth BN]ribosomal protein uS15
FA [auth BV]ribosomal protein eS21---
GA [auth BW]Ribosomal protein S15a
HA [auth BX]Ribosomal protein S23
JA [auth Ba]ribosomal protein eS26---
KA [auth Bb]ribosomal protein eS27---
MA [auth A3]5.8S ribosomal RNA---
D [auth Bw]pe/E-site-tRNA---
OA [auth AA]Ribosomal protein L8
PA [auth AB]ribosomal protein uL3---
QA [auth AC]ribosomal protein uL4---
RA [auth AD]ribosomal protein uL18---
TA [auth AF]ribosomal protein uL30---
VA [auth AH]ribosomal protein uL6---
WA [auth AI]Ribosomal protein L10 (Predicted)
E [auth B1]18S ribosomal RNA---
YA [auth AL]ribosomal protein eL13---
ZA [auth AM]ribosomal protein eL14---
AB [auth AN]Ribosomal protein L15
BB [auth AO]ribosomal protein uL13---
CB [auth AP]ribosomal protein uL22---
DB [auth AQ]ribosomal protein eL18---
EB [auth AR]ribosomal protein eL19---
GB [auth AT]ribosomal protein eL21
F [auth BD]ribosomal protein uS3---
IB [auth AV]Ribosomal protein L23
JB [auth AW]ribosomal protein eL24
MB [auth AZ]60S ribosomal protein L27
NB [auth Aa]ribosomal protein uL15---
OB [auth Ab]ribosomal protein eL29---
PB [auth Ac]ribosomal protein eL30---
QB [auth Ad]ribosomal protein eL31
G [auth BF]Ribosomal protein S5
RB [auth Ae]ribosomal protein eL32
SB [auth Af]ribosomal protein eL33---
TB [auth Ag]ribosomal protein eL34---
VB [auth Ai]ribosomal protein eL36---
WB [auth Aj]Ribosomal protein L37
XB [auth Ak]ribosomal protein eL38---
YB [auth Al]ribosomal protein eL39
ZB [auth Am]ribosomal protein eL40---
AC [auth An]ribosomal protein eL41---
EC [auth Au]Ribosomal protein
FC [auth Aq]Ribosomal protein L12
GC [auth AK]ribosomal protein uL10---
HC [auth Ct]eukaryotic elongation factor 2 (eEF2)---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
H [auth BK]IPR037447Small ribosomal subunit protein eS10Family
H [auth BK]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
H [auth BK]IPR005326Plectin/eS10, N-terminalDomain
I [auth BM]IPR000530Small ribosomal subunit protein eS12Family
I [auth BM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
I [auth BM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
I [auth BM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
P [auth BZ]IPR004977Small ribosomal subunit protein eS25Family
P [auth BZ]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
S [auth Bf]IPR019954Ubiquitin conserved siteConserved Site
S [auth Bf]IPR000626Ubiquitin-like domainDomain
S [auth Bf]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
S [auth Bf]IPR002906Small ribosomal subunit protein eS31Domain
S [auth Bf]IPR019956Ubiquitin domainDomain
S [auth Bf]IPR050158Ubiquitin and ubiquitin-likeFamily
S [auth Bf]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
S [auth Bf]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
T [auth Bg]IPR019775WD40 repeat, conserved siteConserved Site
T [auth Bg]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
T [auth Bg]IPR045223Small ribosomal subunit protein RACK1-likeFamily
T [auth Bg]IPR001680WD40 repeatRepeat
T [auth Bg]IPR020472G-protein beta WD-40 repeatRepeat
T [auth Bg]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
Y [auth BG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
Y [auth BG]IPR001377Small ribosomal subunit protein eS6Family
Y [auth BG]IPR014401Small ribosomal subunit protein eS6-likeFamily
XA [auth AJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
XA [auth AJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
XA [auth AJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
XA [auth AJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
XA [auth AJ]IPR002132Large ribosomal subunit protein uL5Family
LB [auth AY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
LB [auth AY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
LB [auth AY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
LB [auth AY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
LB [auth AY]IPR005824KOWDomain
LB [auth AY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
BC [auth Ao]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
BC [auth Ao]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BC [auth Ao]IPR000552Large ribosomal subunit protein eL42Family
CC [auth Ap]IPR002674Large ribosomal subunit protein eL43Family
CC [auth Ap]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
CC [auth Ap]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
L [auth BR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
L [auth BR]IPR001210Small ribosomal subunit protein eS17Family
L [auth BR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
M [auth BS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
M [auth BS]IPR001892Small ribosomal subunit protein uS13Family
M [auth BS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
M [auth BS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
Q [auth Bc]IPR028626Ribosomal protein eS28 conserved siteConserved Site
Q [auth Bc]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Q [auth Bc]IPR000289Small ribosomal subunit protein eS28Family
R [auth Bd]IPR001209Small ribosomal subunit protein uS14Family
R [auth Bd]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
R [auth Bd]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
R [auth Bd]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
V [auth BB]IPR001593Small ribosomal subunit protein eS1Family
V [auth BB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
V [auth BB]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
Z [auth BH]IPR000554Small ribosomal subunit protein eS7Family
Z [auth BH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
BA [auth BJ]IPR002942RNA-binding S4 domainDomain
BA [auth BJ]IPR022801Small ribosomal subunit protein uS4Family
BA [auth BJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
BA [auth BJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
BA [auth BJ]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
BA [auth BJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
CA [auth BL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
CA [auth BL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CA [auth BL]IPR000266Small ribosomal subunit protein uS17Family
CA [auth BL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
CA [auth BL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
DA [auth BN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
DA [auth BN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
DA [auth BN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
DA [auth BN]IPR000589Small ribosomal subunit protein uS15Family
GA [auth BW]IPR000630Small ribosomal subunit protein uS8Family
GA [auth BW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
GA [auth BW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
HA [auth BX]IPR006032Small ribosomal subunit protein uS12Family
HA [auth BX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
HA [auth BX]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
OA [auth AA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
OA [auth AA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
OA [auth AA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
OA [auth AA]IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
OA [auth AA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
OA [auth AA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
OA [auth AA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
OA [auth AA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
OA [auth AA]IPR002171Large ribosomal subunit protein uL2Family
WA [auth AI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
WA [auth AI]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
WA [auth AI]IPR016180Large ribosomal subunit protein uL16 domainDomain
WA [auth AI]IPR047873Large ribosomal subunit protein uL16Family
WA [auth AI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
AB [auth AN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
AB [auth AN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
AB [auth AN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
AB [auth AN]IPR000439Large ribosomal subunit protein eL15Family
GB [auth AT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
GB [auth AT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
GB [auth AT]IPR001147Large ribosomal subunit protein eL21Family
GB [auth AT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IB [auth AV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
IB [auth AV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
IB [auth AV]IPR000218Large ribosomal subunit protein uL14Family
JB [auth AW]IPR011017TRASH domainDomain
JB [auth AW]IPR000988Large ribosomal subunit protein eL24-relatedFamily
JB [auth AW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
JB [auth AW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
MB [auth AZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
MB [auth AZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MB [auth AZ]IPR001141Large ribosomal subunit protein eL27Family
MB [auth AZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
MB [auth AZ]IPR005824KOWDomain
MB [auth AZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
QB [auth Ad]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
QB [auth Ad]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
QB [auth Ad]IPR000054Large ribosomal subunit protein eL31Family
G [auth BF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
G [auth BF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
G [auth BF]IPR000235Small ribosomal subunit protein uS7Family
G [auth BF]IPR023798Small ribosomal subunit protein uS7 domainDomain
G [auth BF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
RB [auth Ae]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
RB [auth Ae]IPR001515Large ribosomal subunit protein eL32Family
RB [auth Ae]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
WB [auth Aj]IPR001569Large ribosomal subunit protein eL37Family
WB [auth Aj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
WB [auth Aj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
WB [auth Aj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
YB [auth Al]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
YB [auth Al]IPR000077Large ribosomal subunit protein eL39Family
YB [auth Al]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
EC [auth Au]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
EC [auth Au]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
EC [auth Au]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
EC [auth Au]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
EC [auth Au]IPR002143Large ribosomal subunit protein uL1Family
EC [auth Au]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
FC [auth Aq]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
FC [auth Aq]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
FC [auth Aq]IPR000911Ribosomal protein uL11Family
FC [auth Aq]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
FC [auth Aq]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
FC [auth Aq]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
HC [auth Ct]DDE Parent Component: HIS

RESIDAA0040

PSI-MOD :  2'-[3-carboxamido-3-(trimethylammonio)propyl]-L-histidine MOD:00049