6GS7
Crystal structure of peptide transporter DtpA-nanobody in glycine buffer
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PTR2 | e6gs7A1 | A: alpha complex topology | X: Major facilitator superfamily (MFS) general substrate transporter (From Topology) | H: Major facilitator superfamily (MFS) general substrate transporter (From Topology) | T: Major facilitator superfamily (MFS) general substrate transporter | F: PTR2 | ECOD (1.6) |
B [auth H] | V-set_12 | e6gs7H1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.1250.20 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
B [auth H] | Heavy Chain | IGHV1 | - | dipeptide and tripeptide permease a | SAbDab (2024-08-16) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00854 | POT family (PTR2) | POT family | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050171 | Major Facilitator Superfamily (MFS) Transporters | Family | |
IPR005279 | Dipeptide/tripeptide permease | Family | |
IPR023517 | Amino acid/peptide transporter family, dipeptide and tripeptide permease A | Family | |
IPR000109 | Proton-dependent oligopeptide transporter family | Family | |
IPR018456 | PTR2 family proton/oligopeptide symporter, conserved site | Conserved Site | |
IPR036259 | MFS transporter superfamily | Homologous Superfamily | |
IPR020846 | Major facilitator superfamily domain | Domain |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |