6G8H | pdb_00006g8h

Flavonoid-responsive Regulator FrrA in complex with (R,S)-Naringenin

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth BBB]	LlgE_F_G_D1	e6g8hBBB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
C [auth AAA]	LlgE_F_G_D1	e6g8hAAA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
B [auth DDD]	LlgE_F_G_D1	e6g8hDDD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: LlgE_F_G_D1	ECOD (v295)
A [auth CCC]		e6g8hCCC01	A: alpha arrays	X: Ribonuclease H-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F:	ECOD (v295)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth CCC], B [auth DDD], C [auth AAA], D [auth BBB]	PF00440	Bacterial regulatory proteins, tetR family (TetR_N)	Bacterial regulatory proteins, tetR family		Domain
A [auth CCC], B [auth DDD], C [auth AAA], D [auth BBB]	PF14246	AefR-like transcriptional repressor, C-terminal domain (TetR_C_7)	AefR-like transcriptional repressor, C-terminal domain	This family comprises the C-terminal domain of transcriptional regulators of the TetR family. It includes the AefR transcriptional regulator from P. syringae [1]. It is found in association with Pfam:PF00440.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth CCC], B [auth DDD], C [auth AAA], D [auth BBB]	Transcriptional regulatory protein	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding transcription regulator activity DNA-binding transcription factor activity	regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process cellular process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth CCC], B [auth DDD], C [auth AAA], D [auth BBB]	IPR023772	DNA-binding HTH domain, TetR-type, conserved site	Conserved Site
A [auth CCC], B [auth DDD], C [auth AAA], D [auth BBB]	IPR009057	Homeodomain-like superfamily	Homologous Superfamily
A [auth CCC], B [auth DDD], C [auth AAA], D [auth BBB]	IPR050109	HTH-type, TetR-like transcriptional regulator	Family
A [auth CCC], B [auth DDD], C [auth AAA], D [auth BBB]	IPR001647	DNA-binding HTH domain, TetR-type	Domain
A [auth CCC], B [auth DDD], C [auth AAA], D [auth BBB]	IPR036271	Tetracyclin repressor-like, C-terminal domain superfamily	Homologous Superfamily
A [auth CCC], B [auth DDD], C [auth AAA], D [auth BBB]	IPR039536	Transcriptional regulator TetR, C-terminal, Proteobacteria type	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.