6FRG
Crystal structure of G-1F mutant of Ssp DnaB Mini-Intein variant M86
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6frga_ | All beta proteins | Hedgehog/intein (Hint) domain | Hedgehog/intein (Hint) domain | Intein (protein splicing domain) | automated matches | (Synechocystis sp. PCC 6803 substr. Kazusa ) [TaxId: 1111708 ], (Synechocystis sp. PCC 6803 substr. Kazusa ) [TaxId: 1111708 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.170.16.10 | Mainly Beta | Beta Complex | Endonuclease - Pi-scei | Chain A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14890 | Intein splicing domain (Intein_splicing) | Intein splicing domain | - | Family | |
PF03796 | DnaB-like helicase C terminal domain (DnaB_C) | DnaB-like helicase C terminal domain | The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the q ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036844 | Hint domain superfamily | Homologous Superfamily | |
IPR006142 | Intein | Domain | |
IPR004042 | Intein DOD homing endonuclease, central region | Domain | |
IPR007692 | DNA helicase, DnaB type | Family | |
IPR006141 | Intein N-terminal splicing region | PTM | |
IPR003586 | Hint domain C-terminal | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR016136 | DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal | Homologous Superfamily | |
IPR030934 | Intein C-terminal splicing region | Conserved Site | |
IPR007693 | DNA helicase, DnaB-like, N-terminal | Domain | |
IPR007694 | DNA helicase, DnaB-like, C-terminal | Domain | |
IPR027434 | Homing endonuclease | Homologous Superfamily | |
IPR004860 | Homing endonuclease, LAGLIDADG domain | Domain | |
IPR003587 | Hint domain N-terminal | Domain | |
IPR036185 | DNA helicase, DnaB-like, N-terminal domain superfamily | Homologous Superfamily |