6FB9 | pdb_00006fb9

Crystal Structure of the I-CreI Homing Endonuclease D75N variant in complex with an altered version of its target DNA at 5NNN region in the presence of Manganese

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth B]SCOP2B SuperfamilyHoming endonucleases 8032709 3000266 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilyHoming endonucleases 8032709 3000266 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth B]Anoctamine6fb9B1 A: beta barrelsX: Surp module (SWAP domain)H: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.2)
C [auth A]Anoctamine6fb9A1 A: beta barrelsX: Surp module (SWAP domain)H: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D [auth B]3.10.28.10 Alpha Beta Roll Endonuclease I-creI Homing endonucleasesCATH (4.3.0)
C [auth A]3.10.28.10 Alpha Beta Roll Endonuclease I-creI Homing endonucleasesCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
F [auth D]DNA (5'-D(P*GP*AP*CP*GP*TP*TP*TP*TP*GP*A)-3')---
E [auth F]DNA (5'-D(P*GP*CP*AP*GP*TP*TP*TP*TP*GP*A)-3')---
C [auth A],
D [auth B]		DNA endonuclease I-CreI
B [auth C]DNA (5'-D(*TP*CP*AP*AP*AP*AP*CP*TP*GP*CP*GP*TP*AP*C)-3')---
A [auth E]DNA (5'-D(*TP*CP*AP*AP*AP*AP*CP*GP*TP*CP*GP*TP*AP*C)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth A],
D [auth B]		IPR004860Homing endonuclease, LAGLIDADG domainDomain
C [auth A],
D [auth B]		IPR027434Homing endonucleaseHomologous Superfamily