Crystal structure of the human TAF5-TAF6-TAF9 complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| K | SCOP2B Superfamily | Core histone-like | 8081687 | 3001387 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | Core histone-like | 8081687 | 3001387 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Core histone-like | 8081687 | 3001387 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Core histone-like | 8081687 | 3001387 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Taf5 N-terminal domain-like | 8034920 | 3001495 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Taf5 N-terminal domain-like | 8034920 | 3001495 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Taf5 N-terminal domain-like | 8034920 | 3001495 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Taf5 N-terminal domain-like | 8034920 | 3001495 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| L | AAA_lid_3 | e6f3tL1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: AAA_lid_3 | ECOD (v295.2) |
| J | AAA_lid_3 | e6f3tJ1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: AAA_lid_3 | ECOD (v295.2) |
| H | AAA_lid_3 | e6f3tH1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: AAA_lid_3 | ECOD (v295.2) |
| F | RRM_SRRT | e6f3tF01 | A: alpha arrays | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: RRM_SRRT | ECOD (v295.2) |
| K | Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | e6f3tK1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | ECOD (v295.2) |
| I | Gag_p30 | e6f3tI1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: Gag_p30 | ECOD (v295.2) |
| G | Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | e6f3tG1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | ECOD (v295.2) |
| E | Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | e6f3tE1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | ECOD (v295.2) |
| D | TFIID_NTD2 | e6f3tD1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: TFIID_NTD2 | ECOD (v295.2) |
| C | TFIID_NTD2 | e6f3tC1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: TFIID_NTD2 | ECOD (v295.2) |
| B | TFIID_NTD2 | e6f3tB1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: TFIID_NTD2 | ECOD (v295.2) |
| A | TFIID_NTD2 | e6f3tA1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: TFIID_NTD2 | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| K | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (utative) |
| I | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (utative) |
| G | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (utative) |
| E | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF02291 | Transcription initiation factor IID, 31kD subunit (TFIID-31kDa) | Transcription initiation factor IID, 31kD subunit | This family represents the N-terminus of the 31kD subunit (42kD in drosophila) of transcription initiation factor IID (TAFII31). TAFII31 binds to p53, and is an essential requirement for p53 mediated transcription activation. | Domain | |
| PF02969 | TATA box binding protein associated factor (TAF) (TAF) | TATA box binding protein associated factor (TAF) | TAF proteins adopt a histone-like fold. | Domain | |
| PF04494 | WD40 associated region in TFIID subunit, NTD2 domain (TFIID_NTD2) | WD40 associated region in TFIID subunit, NTD2 domain | - | Family | |
| PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |