6ER4
Ruminococcus gnavus IT-sialidase CBM40 bound to alpha2,6 sialyllactose
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Trans-sialidase N-terminal domain-like | 8097151 | 4002727 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Concanavalin A-like lectins/glucanases | 8097152 | 3000120 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8097152 | 3000120 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Laminin_G_3 | e6er4A1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: Laminin_G_3 | ECOD (1.6) |
B | Laminin_G_3 | e6er4B1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: Laminin_G_3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
B | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02973 | Sialidase, N-terminal domain (Sialidase) | Sialidase, N-terminal domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
BNR/Asp-box repeat protein | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily | |
IPR004124 | Glycoside hydrolase, family 33, N-terminal | Domain | |
IPR011040 | Sialidase | Domain | |
IPR026856 | Sialidase family | Family | |
IPR023364 | Trans-sialidase, domain 3 | Homologous Superfamily | |
IPR036278 | Sialidase superfamily | Homologous Superfamily |