6EHR
The crystal structure of the human LAMTOR-RagA CTD-RagC CTD complex
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6ehra_ | Alpha and beta proteins (a+b) | Profilin-like | Roadblock/LC7 domain | Roadblock/LC7 domain | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d6ehrb1 | Alpha and beta proteins (a+b) | Profilin-like | Roadblock/LC7 domain | Roadblock/LC7 domain | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d6ehrb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Roadblock/LC7 domain-like | 8040242 | 3001810 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Roadblock/LC7 domain-like | 8088845 | 3001810 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Roadblock/LC7 domain-like | 8092495 | 3001810 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Roadblock/LC7 domain-like | 8093374 | 3001810 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | MAPKK1_Int | e6ehrA1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: MAPKK1_Int | ECOD (1.6) |
B | Robl_LC7 | e6ehrB1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: Robl_LC7 | ECOD (1.6) |
C | LAMTOR5 | e6ehrC1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: LAMTOR5 | ECOD (1.6) |
D | Robl_LC7 | e6ehrD1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: Robl_LC7 | ECOD (1.6) |
F | Gtr1_RagA_C_1 | e6ehrF1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: Gtr1_RagA_C_1 | ECOD (1.6) |
G | Gtr1_RagA_C | e6ehrG1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: Gtr1_RagA_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.450.30 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | Dynein light chain 2a, cytoplasmic | CATH (4.3.0) |
B | 3.30.450.30 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | Dynein light chain 2a, cytoplasmic | CATH (4.3.0) |
C | 3.30.450.30 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | Dynein light chain 2a, cytoplasmic | CATH (4.3.0) |
F | 3.30.450.190 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | CATH (4.3.0) | |
G | 3.30.450.190 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08923 | Mitogen-activated protein kinase kinase 1 interacting (MAPKK1_Int) | Mitogen-activated protein kinase kinase 1 interacting | Mitogen-activated protein kinase kinase 1 interacting protein is a small subcellular adaptor protein required for MAPK signaling and ERK1/2 activation. The overall topology of this domain has a central five-stranded beta-sheet sandwiched between a tw ... | Domain | |
PF03259 | Roadblock/LC7 domain (Robl_LC7) | Roadblock/LC7 domain | This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is pro ... | Domain | |
PF16672 | Ragulator complex protein LAMTOR5 (LAMTOR5) | Ragulator complex protein LAMTOR5 | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015019 | Ragulator complex protein LAMTOR3 | Family | |
IPR037587 | Ragulator complex protein LAMTOR2-like | Family | |
IPR004942 | Roadblock/LAMTOR2 domain | Domain | |
IPR024135 | Ragulator complex protein LAMTOR5 | Family | |
IPR034601 | Ragulator complex protein LAMTOR4 | Family | |
IPR028209 | LAMTOR1/MEH1 | Family | |
IPR039397 | RagA/B | Family | |
IPR006762 | Gtr1/RagA G protein | Family | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR006762 | Gtr1/RagA G protein | Family | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR039400 | RagC/D | Family |