6E2G
Cryo-EM structure of rat TRPV6 in complex with Calmodulin
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Voltage-gated potassium channels | 8089818 | 3000023 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Ankyrin repeat | 8089801 | 3000154 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Voltage-gated potassium channels | 8089818 | 3000023 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ankyrin repeat | 8089801 | 3000154 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Voltage-gated potassium channels | 8089818 | 3000023 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ankyrin repeat | 8089801 | 3000154 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Voltage-gated potassium channels | 8089818 | 3000023 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Ankyrin repeat | 8089801 | 3000154 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | EF-hand | 8033438 | 3001983 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ank_2 | e6e2gA2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2 | ECOD (1.6) |
A | Ion_trans | e6e2gA1 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans | ECOD (1.6) |
D | Ank_2 | e6e2gD1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2 | ECOD (1.6) |
D | Ion_trans | e6e2gD2 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans | ECOD (1.6) |
E | EF-hand_7_8 | e6e2gE1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
E | EF-hand_7_5 | e6e2gE2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12796 | Ankyrin repeats (3 copies) (Ank_2) | Ankyrin repeats (3 copies) | - | Repeat | |
PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family | |
PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002110 | Ankyrin repeat | Repeat | |
IPR005821 | Ion transport domain | Domain | |
IPR036770 | Ankyrin repeat-containing domain superfamily | Homologous Superfamily | |
IPR024862 | Transient receptor potential cation channel subfamily V | Family | |
IPR008345 | Transient receptor potential cation channel subfamily V member 6 | Family | |
IPR008344 | Transient receptor potential cation channel subfamily V member 5/6 | Family | |
IPR050145 | Centrin/CML-like | Family | |
IPR002048 | EF-hand domain | Domain | |
IPR018247 | EF-Hand 1, calcium-binding site | Binding Site | |
IPR011992 | EF-hand domain pair | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Ion channel (VIC) superfamily | Transient receptor potential channels |