6DWB
Structure of the Salmonella SPI-1 type III secretion injectisome needle filament
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
AA [auth a] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
CA [auth c] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
DA [auth d] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
O | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
P | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
Q | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
R | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
S | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
T | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
U | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
V | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
W | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
X | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
Y | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
Z | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
BA [auth b] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
M | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
N | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | T3SS_needle_F | e6dwbA1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
AA [auth a] | T3SS_needle_F | e6dwba1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
B | T3SS_needle_F | e6dwbB1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
C | T3SS_needle_F | e6dwbC1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
CA [auth c] | T3SS_needle_F | e6dwbc1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
D | T3SS_needle_F | e6dwbD1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
DA [auth d] | T3SS_needle_F | e6dwbd1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
F | T3SS_needle_F | e6dwbF1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
G | T3SS_needle_F | e6dwbG1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
H | T3SS_needle_F | e6dwbH1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
I | T3SS_needle_F | e6dwbI1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
J | T3SS_needle_F | e6dwbJ1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
K | T3SS_needle_F | e6dwbK1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
O | T3SS_needle_F | e6dwbO1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
P | T3SS_needle_F | e6dwbP1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
Q | T3SS_needle_F | e6dwbQ1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
R | T3SS_needle_F | e6dwbR1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
S | T3SS_needle_F | e6dwbS1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
T | T3SS_needle_F | e6dwbT1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
U | T3SS_needle_F | e6dwbU1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
V | T3SS_needle_F | e6dwbV1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
W | T3SS_needle_F | e6dwbW1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
X | T3SS_needle_F | e6dwbX1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
Y | T3SS_needle_F | e6dwbY1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
Z | T3SS_needle_F | e6dwbZ1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
BA [auth b] | T3SS_needle_F | e6dwbb1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
E | T3SS_needle_F | e6dwbE1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
L | T3SS_needle_F | e6dwbL1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
M | T3SS_needle_F | e6dwbM1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
N | T3SS_needle_F | e6dwbN1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09392 | Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF (T3SS_needle_F) | Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR037203 | Type III secretion, needle-protein-like superfamily | Homologous Superfamily | |
IPR021123 | Type III secretion, needle-protein-like | Family | |
IPR011841 | Type III secretion system, needle protein | Family |