6DK0
Human sigma-1 receptor bound to NE-100
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | RmlC-like cupins | 8093035 | 3001825 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | RmlC-like cupins | 8093035 | 3001825 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | RmlC-like cupins | 8093035 | 3001825 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | PF04622 | e6dk0C2 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: PF04622 | ECOD (1.6) |
C | F_UNCLASSIFIED | e6dk0C1 | A: extended segments | X: Transmembrane helix of sigma-1 receptor (From Topology) | H: Transmembrane helix of sigma-1 receptor (From Topology) | T: Transmembrane helix of sigma-1 receptor | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF04622 | e6dk0A1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: PF04622 | ECOD (1.6) |
A | F_UNCLASSIFIED | e6dk0A2 | A: extended segments | X: Transmembrane helix of sigma-1 receptor (From Topology) | H: Transmembrane helix of sigma-1 receptor (From Topology) | T: Transmembrane helix of sigma-1 receptor | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF04622 | e6dk0B2 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: PF04622 | ECOD (1.6) |
B | F_UNCLASSIFIED | e6dk0B1 | A: extended segments | X: Transmembrane helix of sigma-1 receptor (From Topology) | H: Transmembrane helix of sigma-1 receptor (From Topology) | T: Transmembrane helix of sigma-1 receptor | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04622 | ERG2 and Sigma1 receptor like protein (ERG2_Sigma1R) | ERG2 and Sigma1 receptor like protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006716 | ERG2/sigma1 receptor-like | Family |
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |