6D5F | pdb_00006d5f

Cryo-EM reconstruction of membrane-enveloped filamentous virus SFV1 (Sulfolobus filamentous virus 1)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ZA [auth z]Levi_coate6d5fz1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
YA [auth y]Levi_coate6d5fy1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
XA [auth x]Levi_coate6d5fx1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
WA [auth w]Levi_coate6d5fw1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
VA [auth v]Levi_coate6d5fv1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
UA [auth u]Levi_coate6d5fu1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
TA [auth t]Levi_coate6d5ft1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
SA [auth s]Levi_coate6d5fs1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
RA [auth r]Levi_coate6d5fr1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
QA [auth q]Levi_coate6d5fq1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
PA [auth p]Levi_coate6d5fp1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
OA [auth o]Levi_coate6d5fo1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
NA [auth n]Levi_coate6d5fn1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
MA [auth m]Levi_coate6d5fm1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
LA [auth l]Levi_coate6d5fl1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
KA [auth k]Levi_coate6d5fk1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
JA [auth j]Levi_coate6d5fj1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
IA [auth i]Levi_coate6d5fi1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
HA [auth h]Levi_coate6d5fh1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
GA [auth g]Levi_coate6d5fg1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
FA [auth f]Levi_coate6d5ff1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
EA [auth e]Levi_coate6d5fe1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
DA [auth d]Levi_coate6d5fd1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
CA [auth c]Levi_coate6d5fc1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
BA [auth b]Levi_coate6d5fb1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Levi_coatECOD (v294.2)
AA [auth a]SFV1_VP4e6d5fa1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: SFV1_VP4ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF25648Sulfolobus filamentous virus 1 major coat protein VP5 (SFV1_VP5)Sulfolobus filamentous virus 1 major coat protein VP5- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR057957Major coat protein VP5Family