6D03

Cryo-EM structure of a Plasmodium vivax invasion complex essential for entry into human reticulocytes; one molecule of parasite ligand.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyZn-dependent exopeptidases 8032205 3000662 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPA domain 8043922 3000955 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTransferrin receptor-like dimerisation domain 8037591 3000375 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyZn-dependent exopeptidases 8032205 3000662 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyZn-dependent exopeptidases 8032205 3000662 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyZn-dependent exopeptidases 8032205 3000662 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPA domain 8043922 3000955 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTransferrin receptor-like dimerisation domain 8037591 3000375 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyType 2 solute binding protein-like 8041066 3000083 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyType 2 solute binding protein-like 8041066 3000083 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATFR_dimere6d03A3 A: alpha bundlesX: N-cbl likeH: Transferrin receptor ectodomain, C-terminal domain (From Topology)T: Transferrin receptor ectodomain, C-terminal domainF: TFR_dimerECOD (1.6)
APeptidase_M28e6d03A2 A: a/b three-layered sandwichesX: Phosphorylase/hydrolase-likeH: Zn-dependent exopeptidases (From Topology)T: Zn-dependent exopeptidasesF: Peptidase_M28ECOD (1.6)
APAe6d03A1 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PAECOD (1.6)
BTFR_dimere6d03B3 A: alpha bundlesX: N-cbl likeH: Transferrin receptor ectodomain, C-terminal domain (From Topology)T: Transferrin receptor ectodomain, C-terminal domainF: TFR_dimerECOD (1.6)
BPeptidase_M28e6d03B2 A: a/b three-layered sandwichesX: Phosphorylase/hydrolase-likeH: Zn-dependent exopeptidases (From Topology)T: Zn-dependent exopeptidasesF: Peptidase_M28ECOD (1.6)
BPAe6d03B1 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PAECOD (1.6)
CTransferrin_2nde6d03C1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: Transferrin_2ndECOD (1.6)
CTransferrin_1ste6d03C3 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: Transferrin_1stECOD (1.6)
DTransferrin_2nde6d03D2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: Transferrin_2ndECOD (1.6)
DTransferrin_1ste6d03D1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: Transferrin_1stECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF04253Transferrin receptor-like dimerisation domain (TFR_dimer)Transferrin receptor-like dimerisation domainThis domain is involved in dimerisation of the transferrin receptor as shown in its crystal structure.Domain
A, B
PF04389Peptidase family M28 (Peptidase_M28)Peptidase family M28- Family
A, B
PF02225PA domain (PA)PA domain- Family
C, D
PF00405Transferrin (Transferrin)Transferrin- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Transferrin receptor protein 1
C, D
Serotransferrin
Reticulocyte binding protein 2, putative- - -

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, B
PharosP02786
C, D
PharosP02787