6CZF
The structure of E. coli PurF in complex with ppGpp-Mg
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036749 | 3000131 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | PRTase-like | 8032223 | 3000060 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | PRTase-like | 8032223 | 3000060 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036749 | 3000131 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | PRTase-like | 8032223 | 3000060 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036749 | 3000131 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | PRTase-like | 8032223 | 3000060 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036749 | 3000131 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GATase_2_1st | e6czfA1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Class II glutamine amidotransferases | F: GATase_2_1st | ECOD (1.6) |
A | Pribosyltran | e6czfA2 | A: a/b three-layered sandwiches | X: PRTase-like (From Topology) | H: PRTase-like (From Topology) | T: PRTase-like | F: Pribosyltran | ECOD (1.6) |
B | GATase_2_1st | e6czfB2 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Class II glutamine amidotransferases | F: GATase_2_1st | ECOD (1.6) |
B | Pribosyltran | e6czfB1 | A: a/b three-layered sandwiches | X: PRTase-like (From Topology) | H: PRTase-like (From Topology) | T: PRTase-like | F: Pribosyltran | ECOD (1.6) |
C | GATase_2_1st | e6czfC2 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Class II glutamine amidotransferases | F: GATase_2_1st | ECOD (1.6) |
C | Pribosyltran | e6czfC1 | A: a/b three-layered sandwiches | X: PRTase-like (From Topology) | H: PRTase-like (From Topology) | T: PRTase-like | F: Pribosyltran | ECOD (1.6) |
D | GATase_2_1st | e6czfD1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Class II glutamine amidotransferases | F: GATase_2_1st | ECOD (1.6) |
D | Pribosyltran | e6czfD2 | A: a/b three-layered sandwiches | X: PRTase-like (From Topology) | H: PRTase-like (From Topology) | T: PRTase-like | F: Pribosyltran | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00156 | Phosphoribosyl transferase domain (Pribosyltran) | Phosphoribosyl transferase domain | This family includes a range of diverse phosphoribosyl transferase enzymes. This family includes: Adenine phosphoribosyl-transferase EC:2.4.2.7, Swiss:P07672. Hypoxanthine-guanine-xanthine phosphoribosyl-transferase Swiss:P51900. Hypoxanthine phosph ... | Domain | |
PF13522 | Glutamine amidotransferase domain (GATase_6) | Glutamine amidotransferase domain | This domain is a class-II glutamine amidotransferase domain found in a variety of enzymes, such as asparagine synthetase and glutamine--fructose-6-phosphate transaminase. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029055 | Nucleophile aminohydrolases, N-terminal | Homologous Superfamily | |
IPR000836 | Phosphoribosyltransferase domain | Domain | |
IPR035584 | Amidophosphoribosyltransferase, N-terminal | Domain | |
IPR005854 | Amidophosphoribosyltransferase | Family | |
IPR017932 | Glutamine amidotransferase type 2 domain | Domain | |
IPR029057 | Phosphoribosyltransferase-like | Homologous Superfamily |