6BVN
Cryo-EM Structure of Hepatitis B virus T=3 capsid in complex with the fluorescent allosteric modulator HAP-TAMRA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth C] | SCOP2B Superfamily | Hepatitis B viral capsid (hbcag) | 8086395 | 3000581 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Hepatitis B viral capsid (hbcag) | 8086395 | 3000581 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | Hepatitis B viral capsid (hbcag) | 8086395 | 3000581 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | Hepatitis_core | e6bvnC1 | A: alpha arrays | X: Hepatitis B viral capsid (hbcag) (From Topology) | H: Hepatitis B viral capsid (hbcag) (From Topology) | T: Hepatitis B viral capsid (hbcag) | F: Hepatitis_core | ECOD (1.6) |
B | Hepatitis_core | e6bvnB1 | A: alpha arrays | X: Hepatitis B viral capsid (hbcag) (From Topology) | H: Hepatitis B viral capsid (hbcag) (From Topology) | T: Hepatitis B viral capsid (hbcag) | F: Hepatitis_core | ECOD (1.6) |
C [auth A] | Hepatitis_core | e6bvnA1 | A: alpha arrays | X: Hepatitis B viral capsid (hbcag) (From Topology) | H: Hepatitis B viral capsid (hbcag) (From Topology) | T: Hepatitis B viral capsid (hbcag) | F: Hepatitis_core | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth C] | 1.10.4090.10 | Mainly Alpha | Orthogonal Bundle | Hepatitis B viral capsid (hbcag) fold | Viral capsid, core domain supefamily, Hepatitis B virus | CATH (4.3.0) |
B | 1.10.4090.10 | Mainly Alpha | Orthogonal Bundle | Hepatitis B viral capsid (hbcag) fold | Viral capsid, core domain supefamily, Hepatitis B virus | CATH (4.3.0) |
C [auth A] | 1.10.4090.10 | Mainly Alpha | Orthogonal Bundle | Hepatitis B viral capsid (hbcag) fold | Viral capsid, core domain supefamily, Hepatitis B virus | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], B, C [auth A] | PF00906 | Hepatitis core antigen (Hepatitis_core) | Hepatitis core antigen | The core antigen of hepatitis viruses possesses a carboxyl terminus rich in arginine. On this basis it was predicted that the core antigen would bind DNA [1]. There is some experimental evidence to support this [2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C], B, C [auth A] | IPR036459 | Viral capsid core domain supefamily, Hepatitis B virus | Homologous Superfamily |
A [auth C], B, C [auth A] | IPR002006 | Hepatitis core antigen | Family |