6BUS
Extended E2 DNA-binding domain of the Bovine Papillomavirus-1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth 1] | d6bus1_ | Alpha and beta proteins (a+b) | Ferredoxin-like | Viral DNA-binding domain | Viral DNA-binding domain | Papillomavirus-1 E2 protein | (Deltapapillomavirus 4 ) [TaxId: 337052 ], | SCOPe (2.08) |
B [auth 2] | d6bus2_ | Alpha and beta proteins (a+b) | Ferredoxin-like | Viral DNA-binding domain | Viral DNA-binding domain | Papillomavirus-1 E2 protein | (Deltapapillomavirus 4 ) [TaxId: 337052 ], | SCOPe (2.08) |
C [auth 3] | d6bus3_ | Alpha and beta proteins (a+b) | Ferredoxin-like | Viral DNA-binding domain | Viral DNA-binding domain | Papillomavirus-1 E2 protein | (Deltapapillomavirus 4 ) [TaxId: 337052 ], | SCOPe (2.08) |
D [auth 4] | d6bus4_ | Alpha and beta proteins (a+b) | Ferredoxin-like | Viral DNA-binding domain | Viral DNA-binding domain | Papillomavirus-1 E2 protein | (Deltapapillomavirus 4 ) [TaxId: 337052 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth 1] | SCOP2B Superfamily | Viral DNA-binding domain | 8035367 | 3001239 | SCOP2B (2022-06-29) |
B [auth 2] | SCOP2B Superfamily | Viral DNA-binding domain | 8035367 | 3001239 | SCOP2B (2022-06-29) |
C [auth 3] | SCOP2B Superfamily | Viral DNA-binding domain | 8035367 | 3001239 | SCOP2B (2022-06-29) |
D [auth 4] | SCOP2B Superfamily | Viral DNA-binding domain | 8035367 | 3001239 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth 1] | PF00511 | e6bus11 | A: a+b two layers | X: Alpha-beta plaits | H: Viral DNA-binding domain (From Topology) | T: Viral DNA-binding domain | F: PF00511 | ECOD (1.6) |
B [auth 2] | PF00511 | e6bus21 | A: a+b two layers | X: Alpha-beta plaits | H: Viral DNA-binding domain (From Topology) | T: Viral DNA-binding domain | F: PF00511 | ECOD (1.6) |
C [auth 3] | PF00511 | e6bus31 | A: a+b two layers | X: Alpha-beta plaits | H: Viral DNA-binding domain (From Topology) | T: Viral DNA-binding domain | F: PF00511 | ECOD (1.6) |
D [auth 4] | PF00511 | e6bus41 | A: a+b two layers | X: Alpha-beta plaits | H: Viral DNA-binding domain (From Topology) | T: Viral DNA-binding domain | F: PF00511 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth 1] | 3.30.70.330 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | RRM (RNA recognition motif) domain | CATH (4.3.0) |
B [auth 2] | 3.30.70.330 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | RRM (RNA recognition motif) domain | CATH (4.3.0) |
C [auth 3] | 3.30.70.330 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | RRM (RNA recognition motif) domain | CATH (4.3.0) |
D [auth 4] | 3.30.70.330 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | RRM (RNA recognition motif) domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth 1], B [auth 2], C [auth 3], D [auth 4] | PF00511 | E2 (early) protein, C terminal (PPV_E2_C) | E2 (early) protein, C terminal | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth 1], B [auth 2], C [auth 3], D [auth 4] | IPR033668 | Regulatory protein E2 | Family |
A [auth 1], B [auth 2], C [auth 3], D [auth 4] | IPR042503 | E2 regulatory, transactivation domain, subdomain 1 | Homologous Superfamily |
A [auth 1], B [auth 2], C [auth 3], D [auth 4] | IPR001866 | Papillomavirus E2, N-terminal | Domain |
A [auth 1], B [auth 2], C [auth 3], D [auth 4] | IPR036050 | E2 regulatory, transactivation domain | Homologous Superfamily |
A [auth 1], B [auth 2], C [auth 3], D [auth 4] | IPR042504 | E2 regulatory, transactivation domain, subdomain 2 | Homologous Superfamily |
A [auth 1], B [auth 2], C [auth 3], D [auth 4] | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily |
A [auth 1], B [auth 2], C [auth 3], D [auth 4] | IPR000427 | Papillomavirus E2, C-terminal | Domain |
A [auth 1], B [auth 2], C [auth 3], D [auth 4] | IPR035975 | E2/EBNA1, C-terminal | Homologous Superfamily |