6BP8
Recombinant major vault protein [Rattus norvegicus] structure in solution: conformation 1
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Vault | e6bp8A5 | A: beta sandwiches | X: Major vault protein (MVP) structural repeat domain (From Topology) | H: Major vault protein (MVP) structural repeat domain (From Topology) | T: Major vault protein (MVP) structural repeat domain | F: Vault | ECOD (1.6) |
A | PTZ00491_2nd | e6bp8A9 | A: beta sandwiches | X: Major vault protein (MVP) structural repeat domain (From Topology) | H: Major vault protein (MVP) structural repeat domain (From Topology) | T: Major vault protein (MVP) structural repeat domain | F: PTZ00491_2nd | ECOD (1.6) |
A | PTZ00491_1st | e6bp8A7 | A: beta sandwiches | X: Major vault protein (MVP) structural repeat domain (From Topology) | H: Major vault protein (MVP) structural repeat domain (From Topology) | T: Major vault protein (MVP) structural repeat domain | F: PTZ00491_1st | ECOD (1.6) |
A | PTZ00491_4th | e6bp8A11 | A: beta sandwiches | X: Major vault protein (MVP) structural repeat domain (From Topology) | H: Major vault protein (MVP) structural repeat domain (From Topology) | T: Major vault protein (MVP) structural repeat domain | F: PTZ00491_4th | ECOD (1.6) |
A | PTZ00491_3rd | e6bp8A3 | A: beta sandwiches | X: Major vault protein (MVP) structural repeat domain (From Topology) | H: Major vault protein (MVP) structural repeat domain (From Topology) | T: Major vault protein (MVP) structural repeat domain | F: PTZ00491_3rd | ECOD (1.6) |
A | MVP_shoulder | e6bp8A8 | A: a+b two layers | X: T-fold | H: Band 7/SPFH domain (From Topology) | T: Band 7/SPFH domain | F: MVP_shoulder | ECOD (1.6) |
A | PTZ00491_5th | e6bp8A1 | A: extended segments | X: Major vault protein (MVP) helical domain (From Topology) | H: Major vault protein (MVP) helical domain (From Topology) | T: Major vault protein (MVP) helical domain | F: PTZ00491_5th | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01505 | Major Vault Protein repeat domain (Vault) | Major Vault Protein repeat domain | The vault is a ubiquitous and highly conserved ribonucleoprotein particle of approximately 13 mDa of unknown function [1]. This family corresponds to a repeated domain found in the amino terminal half of the major vault protein. | Domain | |
PF17794 | Major Vault Protein repeat domain (Vault_2) | Major Vault Protein repeat domain | This short domain is found repeated numerous times in the Major Vault Protein. This entry is related to Pfam:PF01505. | Domain | |
PF17795 | Major Vault Protein Repeat domain (Vault_3) | Major Vault Protein Repeat domain | This domain is found in the Major Vault Protein. | Domain | |
PF17796 | Major Vault Protein repeat domain (Vault_4) | Major Vault Protein repeat domain | - | Domain | |
PF11978 | Shoulder domain (MVP_shoulder) | Shoulder domain | This domain is found in the Major Vault Protein and has been called the shoulder domain [1]. This family includes two bacterial proteins Swiss:A6FXE2 and Swiss:A1ZGE7. This suggests that some bacteria may possess vault particles. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR040989 | Major vault protein repeat domain 3 | Domain | |
IPR039059 | Major vault protein | Family | |
IPR041136 | Major vault protein repeat domain 4 | Domain | |
IPR036013 | Band 7/SPFH domain superfamily | Homologous Superfamily | |
IPR002499 | Major vault protein, N-terminal | Repeat | |
IPR041139 | Major vault protein repeat domain | Domain | |
IPR043023 | Major vault protein repeat domain superfamily | Homologous Superfamily | |
IPR043179 | Major vault protein repeat domain 2 superfamily | Homologous Superfamily | |
IPR021870 | Major vault protein, shoulder domain | Domain | |
IPR041134 | Major vault protein repeat domain 2 | Domain |