6BOX
Structure of the S. pombe Clr4 catalytic domain bound to SAH
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | CXC domain-like | 8051804 | 3002037 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | SET domain | 8043806 | 3000162 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | SET domain | 8043806 | 3000162 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CXC domain-like | 8051804 | 3002037 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00856 | e6boxA1 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: PF00856 | ECOD (1.6) |
A | PF05033 | e6boxA2 | A: few secondary structure elements | X: Zn3Cys9 preSET domain-related (From Topology) | H: Zn3Cys9 preSET domain-related (From Topology) | T: Zn3Cys9 preSET domain-related | F: PF05033 | ECOD (1.6) |
B | PF00856 | e6boxB1 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: PF00856 | ECOD (1.6) |
B | PF05033 | e6boxB2 | A: few secondary structure elements | X: Zn3Cys9 preSET domain-related (From Topology) | H: Zn3Cys9 preSET domain-related (From Topology) | T: Zn3Cys9 preSET domain-related | F: PF05033 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.170.270.10 | Mainly Beta | Beta Complex | Beta-clip-like | SET domain | CATH (4.3.0) |
B | 2.170.270.10 | Mainly Beta | Beta Complex | Beta-clip-like | SET domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00856 | SET domain (SET) | SET domain | - | Family | |
PF05033 | Pre-SET motif (Pre-SET) | Pre-SET motif | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR007728 | Pre-SET domain | Domain | |
IPR046341 | SET domain superfamily | Homologous Superfamily | |
IPR023780 | Chromo domain | Domain | |
IPR050973 | Histone-lysine N-methyltransferase, H3 Lys-9 specific | Family | |
IPR001214 | SET domain | Domain | |
IPR016197 | Chromo-like domain superfamily | Homologous Superfamily | |
IPR023779 | Chromo domain, conserved site | Conserved Site | |
IPR011381 | Histone-lysine N-methyltransferase SUV39H1/2-like | Family | |
IPR003616 | Post-SET domain | Domain | |
IPR000953 | Chromo/chromo shadow domain | Domain |