6BDZ
ADAM10 Extracellular Domain Bound by the 11G2 Fab
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth L] | d6bdzl2 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | C1 set domains (antibody constant domain-like) | automated matches | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
A [auth L] | d6bdzl1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
B [auth H] | d6bdzh_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth L] | PF07654 | e6bdzL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
A [auth L] | PF07686 | e6bdzL2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
B [auth H] | PF07654 | e6bdzH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
B [auth H] | PF07686 | e6bdzH2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
C [auth A] | PF13574 | e6bdzA1 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: PF13574 | ECOD (1.6) |
C [auth A] | PF21299 | e6bdzA3 | A: few secondary structure elements | X: Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins (From Topology) | H: Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins (From Topology) | T: Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins | F: PF21299 | ECOD (1.6) |
C [auth A] | F_UNCLASSIFIED | e6bdzA2 | A: few secondary structure elements | X: Blood coagulation inhibitor (disintegrin) (From Topology) | H: Blood coagulation inhibitor (disintegrin) (From Topology) | T: Blood coagulation inhibitor (disintegrin) | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
A [auth L] | Fab 11G2 | L-KAPPA | Mus musculus (house mouse) | IGKV4-74*01, IGKJ5*01, IGKC*01, IGKC*02 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-1_KAPPA | IMGT (202425-0) |
B [auth H] | Fab 11G2 | VH-CH1 | Mus musculus (house mouse) | IGHV2-6-7*01, IGHV2-6-7*02, IGHJ2*01, IGHG1*02 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_KAPPA | IMGT (202425-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
A [auth L] | Light Chain | IGKV4 | Kappa | disintegrin and metalloproteinase domain-containing protein10 | SAbDab (2024-06-21) |
B [auth H] | Heavy Chain | IGHV2 | - | disintegrin and metalloproteinase domain-containing protein10 | SAbDab (2024-06-21) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A] | PF21299 | ADAM10, cysteine-rich domain (ADAM10_Cys-rich) | ADAM10, cysteine-rich domain | Disintegrin and metalloproteinase domain-containing protein 10 (ADAM10) is a transmembrane endopeptidase responsible for the proteolytic release of several cell-surface proteins, including the membrane-bound precursor of TNF-alpha, ligands and recept ... | Domain |
C [auth A] | PF13574 | Metallo-peptidase family M12B Reprolysin-like (Reprolysin_2) | Metallo-peptidase family M12B Reprolysin-like | This zinc-binding metallo-peptidase has the characteristic binding motif HExxGHxxGxxH of Reprolysin-like peptidases of family M12B. | Domain |
C [auth A] | PF00200 | Disintegrin (Disintegrin) | Disintegrin | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A] | IPR001590 | Peptidase M12B, ADAM/reprolysin | Domain |
C [auth A] | IPR034025 | ADAM10/ADAM17 catalytic domain | Domain |
C [auth A] | IPR001762 | Disintegrin domain | Domain |
C [auth A] | IPR036436 | Disintegrin domain superfamily | Homologous Superfamily |
C [auth A] | IPR024079 | Metallopeptidase, catalytic domain superfamily | Homologous Superfamily |
C [auth A] | IPR049038 | ADAM10, cysteine-rich domain | Domain |