6BBE
Structure of N-glycosylated porcine surfactant protein-D
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6bbea2 | Alpha and beta proteins (a+b) | C-type lectin-like | C-type lectin-like | C-type lectin domain | Surfactant protein, lectin domain | Pig (Sus scrofa ) [TaxId: 9823 ], | SCOPe (2.08) |
A | d6bbea1 | Coiled coil proteins | Parallel coiled-coil | Triple coiled coil domain of C-type lectins | Triple coiled coil domain of C-type lectins | Surfactant protein | Pig (Sus scrofa ) [TaxId: 9823 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.100.10 | Alpha Beta | Roll | Mannose-Binding Protein A | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09006 | Lung surfactant protein D coiled-coil trimerisation (Surfac_D-trimer) | Lung surfactant protein D coiled-coil trimerisation | - | Coiled-coil | |
PF00059 | Lectin C-type domain (Lectin_C) | Lectin C-type domain | This family includes both long and short form C-type | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008160 | Collagen triple helix repeat | Repeat | |
IPR016187 | C-type lectin fold | Homologous Superfamily | |
IPR015097 | Lung surfactant protein D coiled-coil trimerisation | Domain | |
IPR001304 | C-type lectin-like | Domain | |
IPR018378 | C-type lectin, conserved site | Conserved Site | |
IPR016186 | C-type lectin-like/link domain superfamily | Homologous Superfamily | |
IPR050149 | Collagen superfamily | Family |