6AKF
Crystal structure of mouse claudin-3 P134A mutant in complex with C-terminal fragment of Clostridium perfringens enterotoxin
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Claudin-like | 8100758 | 3002606 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2 Family | Claudin-like | 8100757 | 4006038 | SCOP2 (2022-06-29) |
B [auth C] | SCOP2 Superfamily | Claudin-like | 8100758 | 3002606 | SCOP2 (2022-06-29) |
C [auth E] | SCOP2B Superfamily | Claudin-like | 8100758 | 3002606 | SCOP2B (2022-06-29) |
D [auth G] | SCOP2B Superfamily | Claudin-like | 8100758 | 3002606 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00822 | e6akfA1 | A: alpha bundles | X: Bromodomain-like | H: Claudin (From Topology) | T: Claudin | F: PF00822 | ECOD (1.6) |
B [auth C] | PF00822 | e6akfC1 | A: alpha bundles | X: Bromodomain-like | H: Claudin (From Topology) | T: Claudin | F: PF00822 | ECOD (1.6) |
C [auth E] | PF00822 | e6akfE1 | A: alpha bundles | X: Bromodomain-like | H: Claudin (From Topology) | T: Claudin | F: PF00822 | ECOD (1.6) |
D [auth G] | PF00822 | e6akfG1 | A: alpha bundles | X: Bromodomain-like | H: Claudin (From Topology) | T: Claudin | F: PF00822 | ECOD (1.6) |
E [auth B] | PF03505 | e6akfB1 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF03505 | ECOD (1.6) |
F [auth D] | PF03505 | e6akfD1 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF03505 | ECOD (1.6) |
G [auth F] | PF03505 | e6akfF1 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF03505 | ECOD (1.6) |
H | PF03505 | e6akfH1 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF03505 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.140.150 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (4.3.0) |
B [auth C] | 1.20.140.150 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (4.3.0) |
C [auth E] | 1.20.140.150 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (4.3.0) |
D [auth G] | 1.20.140.150 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (4.3.0) |
E [auth B] | 2.60.120.1050 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
F [auth D] | 2.60.120.1050 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
G [auth F] | 2.60.120.1050 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
H | 2.60.120.1050 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C], C [auth E], D [auth G] | PF00822 | PMP-22/EMP/MP20/Claudin family (PMP22_Claudin) | PMP-22/EMP/MP20/Claudin family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C], C [auth E], D [auth G] | IPR006187 | Claudin | Family |
A, B [auth C], C [auth E], D [auth G] | IPR004031 | PMP-22/EMP/MP20/Claudin | Family |
A, B [auth C], C [auth E], D [auth G] | IPR003549 | Claudin-3 | Family |
A, B [auth C], C [auth E], D [auth G] | IPR017974 | Claudin, conserved site | Conserved Site |
E [auth B], F [auth D], G [auth F], H | IPR003897 | Clostridium enterotoxin | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Tetraspan junctional complexes | Claudin |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |