5ZMC

Structural Basis for Reactivation of -146C>T Mutant TERT Promoter by cooperative binding of p52 and ETS1/2

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C [auth B]	SCOP2B Superfamily	Winged helix DNA-binding domain	8056282	3000034	SCOP2B (2022-06-29)
D [auth A]	SCOP2B Superfamily	E set domains	8054871	3000070	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth B]	PF00178	e5zmcB1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PF00178	ECOD (1.6)
D [auth A]	PF16179	e5zmcA1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF16179	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C [auth B]	1.10.10.10	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	CATH (4.3.0)
D [auth A]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth B]	PF00178	Ets-domain (Ets)	Ets-domain	-	Domain
D [auth A]	PF16179	Rel homology dimerisation domain (RHD_dimer)	Rel homology dimerisation domain	The Rel homology domain (RHD) is composed of two structural domains, an N-terminal DNA_binding domain (Pfam:PF00554) and a C-terminal dimerisation domain. This is the dimerisation domain [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth C]	DNA (5'-D(PCPGPGPGPGPAPCPCPCPGPGPAPAPGPGPG)-3')	-	-	-
B [auth D]	DNA (5'-D(PGPCPCPCPTPTPCPCPGPGPGPTPCPCPCPC)-3')	-	-	-
C [auth B]	Protein C-ets-1	transcription factor binding transcription coregulator binding transcription corepressor binding protein binding binding organic cyclic compound binding nucleic acid binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding double-stranded DNA binding transcription regulatory region nucleic acid binding RNA polymerase II-specific DNA-binding transcription factor binding transcription factor binding transcription coregulator binding transcription corepressor binding protein binding binding organic cyclic compound binding nucleic acid binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding double-stranded DNA binding transcription regulatory region nucleic acid binding RNA polymerase II-specific DNA-binding transcription factor binding DNA-binding transcription factor binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription factor activity, RNA polymerase II-specific transcription coactivator activity transcription coregulator activity nuclear receptor coactivator activity protein-macromolecule adaptor activity molecular adaptor activity DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity identical protein binding	developmental process multicellular organismal process regulation of multicellular organismal development regulation of biological process regulation of developmental process blood vessel morphogenesis tube development biological regulation angiogenesis vasculature development regulation of vasculature development circulatory system development multicellular organism development anatomical structure morphogenesis tube morphogenesis developmental process multicellular organismal process regulation of multicellular organismal development regulation of biological process regulation of developmental process blood vessel morphogenesis tube development biological regulation angiogenesis vasculature development regulation of vasculature development circulatory system development multicellular organism development anatomical structure morphogenesis tube morphogenesis regulation of angiogenesis anatomical structure development anatomical structure formation involved in morphogenesis regulation of multicellular organismal process regulation of anatomical structure morphogenesis blood vessel development system development positive regulation of locomotion regulation of cell motility regulation of cellular process endothelial cell migration positive regulation of biological process positive regulation of cell migration positive regulation of epithelial cell migration tissue migration ameboidal-type cell migration positive regulation of cell motility regulation of cell migration regulation of endothelial cell migration cell migration epithelial cell migration cell motility regulation of epithelial cell migration locomotion positive regulation of cellular process epithelium migration regulation of locomotion positive regulation of endothelial cell migration cellular process regulation of defense response response to stimulus regulation of response to external stimulus defense response response to external stimulus regulation of inflammatory response positive regulation of response to stimulus positive regulation of response to external stimulus positive regulation of inflammatory response regulation of response to stimulus regulation of response to stress response to stress positive regulation of defense response inflammatory response immune response immune system process cellular biosynthetic process positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of biosynthetic process cellular metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process positive regulation of gene expression regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of cellular biosynthetic process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process transcription by RNA polymerase II response to chemical response to antibiotic negative regulation of cellular process negative regulation of biological process negative regulation of cell cycle cell cycle regulation of cell cycle regulation of apoptotic process apoptotic process regulation of programmed cell death cell death programmed cell death regulation of primary metabolic process regulation of RNA metabolic process regulation of miRNA metabolic process regulation of nucleobase-containing compound metabolic process miRNA metabolic process positive regulation of nucleobase-containing compound metabolic process positive regulation of RNA metabolic process regulation of DNA-templated transcription positive regulation of DNA-templated transcription positive regulation of miRNA transcription positive regulation of miRNA metabolic process miRNA transcription regulation of RNA biosynthetic process positive regulation of RNA biosynthetic process regulation of miRNA transcription cellular component organization nuclear body organization nucleus organization organelle organization PML body organization cellular component organization or biogenesis regulation of blood vessel endothelial cell migration blood vessel endothelial cell migration positive regulation of blood vessel endothelial cell migration cellular developmental process homeostatic process cell development regulation of cell differentiation regulation of cell development positive regulation of developmental process positive regulation of cell differentiation cell differentiation regulation of immune system process myeloid cell homeostasis erythrocyte homeostasis hemopoiesis regulation of myeloid cell differentiation erythrocyte differentiation regulation of erythrocyte differentiation positive regulation of erythrocyte differentiation multicellular organismal-level homeostasis myeloid cell differentiation positive regulation of myeloid cell differentiation regulation of hemopoiesis homeostasis of number of cells negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation positive regulation of angiogenesis positive regulation of vasculature development positive regulation of multicellular organismal process regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II positive regulation of cell adhesion regulation of cell adhesion positive regulation of leukocyte cell-cell adhesion positive regulation of leukocyte adhesion to vascular endothelial cell regulation of leukocyte adhesion to vascular endothelial cell leukocyte cell-cell adhesion positive regulation of cell-cell adhesion cell adhesion cell-cell adhesion leukocyte adhesion to vascular endothelial cell regulation of leukocyte cell-cell adhesion regulation of cell-cell adhesion	intracellular anatomical structure cytoplasm cellular anatomical entity membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen protein-containing complex intracellular anatomical structure cytoplasm cellular anatomical entity membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen protein-containing complex protein-DNA complex intracellular non-membrane-bounded organelle chromatin chromosome non-membrane-bounded organelle
D [auth A]	Nuclear factor NF-kappa-B p100 subunit	DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding organic cyclic compound binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding transcription regulator activity DNA-binding transcription factor activity DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding organic cyclic compound binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity	cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation canonical NF-kappaB signal transduction intracellular signal transduction cell communication intracellular signaling cassette cellular process signal transduction developmental process multicellular organismal process cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation canonical NF-kappaB signal transduction intracellular signal transduction cell communication intracellular signaling cassette cellular process signal transduction developmental process multicellular organismal process cellular developmental process follicular dendritic cell differentiation cell differentiation cell activation follicular dendritic cell activation cellular component organization extracellular matrix organization cellular component organization or biogenesis extracellular structure organization external encapsulating structure organization biological process involved in interspecies interaction between organisms immune response response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus immune system process defense response to other organism response to stress innate immune response response to external biotic stimulus response to peptide response to chemical response to cytokine non-canonical NF-kappaB signal transduction immune system development multicellular organism development spleen development animal organ development anatomical structure development hematopoietic or lymphoid organ development system development cellular biosynthetic process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process cellular metabolic process primary metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process rhythmic process adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains anatomical structure morphogenesis anatomical structure formation involved in morphogenesis germinal center formation adaptive immune response inflammatory response positive regulation of DNA-templated transcription positive regulation of biological process positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process transcription by RNA polymerase II positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process regulation of transcription by RNA polymerase II positive regulation of nucleobase-containing compound metabolic process positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process positive regulation of cellular biosynthetic process response to lipid response to oxygen-containing compound response to lipopolysaccharide response to bacterium response to molecule of bacterial origin	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen protein-containing complex protein-DNA complex intracellular non-membrane-bounded organelle chromatin chromosome non-membrane-bounded organelle I-kappaB/NF-kappaB complex Bcl3/NF-kappaB2 complex intracellular protein-containing complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth B]	IPR041886	Protein C-ets-1, pointed domain	Domain
C [auth B]	IPR045688	Ets1, N-terminal flanking region of Ets domain	Domain
C [auth B]	IPR013761	Sterile alpha motif/pointed domain superfamily	Homologous Superfamily
C [auth B]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
C [auth B]	IPR000418	Ets domain	Domain
C [auth B]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
C [auth B]	IPR016311	Transforming protein C-ets	Family
C [auth B]	IPR046328	ETS family	Family
C [auth B]	IPR003118	Pointed domain	Domain
D [auth A]	IPR030497	Nuclear factor NF-kappa-B, p100 subunit, RHD domain, N-terminal	Domain
D [auth A]	IPR037059	Rel homology domain (RHD), DNA-binding domain superfamily	Homologous Superfamily
D [auth A]	IPR002909	IPT domain	Domain
D [auth A]	IPR030492	Rel homology domain, conserved site	Conserved Site
D [auth A]	IPR036770	Ankyrin repeat-containing domain superfamily	Homologous Superfamily
D [auth A]	IPR033926	NFkappaB IPT domain	Domain
D [auth A]	IPR008967	p53-like transcription factor, DNA-binding domain superfamily	Homologous Superfamily
D [auth A]	IPR014756	Immunoglobulin E-set	Homologous Superfamily
D [auth A]	IPR011539	Rel homology domain, DNA-binding domain	Domain
D [auth A]	IPR002110	Ankyrin repeat	Repeat
D [auth A]	IPR011029	Death-like domain superfamily	Homologous Superfamily
D [auth A]	IPR000451	NF-kappa-B/Dorsal	Family
D [auth A]	IPR032397	Rel homology dimerisation domain	Domain
D [auth A]	IPR000488	Death domain	Domain
D [auth A]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
C [auth B]	Pharos: P14921	celiac disease cancer systemic lupus erythematosus malignant pancreatic neoplasm oligodendroglioma pancreatic ductal adenocarcinoma psoriasis Sjogren syndrome acute myeloid leukemia type 2 diabetes mellitus B-cell chronic lymphocytic leukemia Duchenne muscular dystrophy glaucoma Jacobsen syndrome lung cancer celiac disease cancer systemic lupus erythematosus malignant pancreatic neoplasm oligodendroglioma pancreatic ductal adenocarcinoma psoriasis Sjogren syndrome acute myeloid leukemia type 2 diabetes mellitus B-cell chronic lymphocytic leukemia Duchenne muscular dystrophy glaucoma Jacobsen syndrome lung cancer malignant ependymoma neoplasm of mature B-cells osteosarcoma pilocytic astrocytoma Reperfusion Injury subependymal giant cell astrocytoma atopic eczema ulcerative colitis gastric cancer glioblastoma juvenile dermatomyositis lung carcinoma malignant glioma non-small cell lung carcinoma ovarian cancer primary biliary cholangitis rheumatoid arthritis atypical teratoid rhabdoid tumor gastric carcinoma ischemia reperfusion injury
D [auth A]	Pharos: Q00653	common variable immunodeficiency immunodeficiency, common variable, 10 Heat Stroke primary cutaneous T-cell non-Hodgkin lymphoma rheumatoid arthritis atopic eczema mantle cell lymphoma plasma cell myeloma agammaglobulinemia B cell deficiency deficiency in anterior pituitary function - variable immunodeficiency syndrome immunodeficiency, common variable, 1 lung cancer osteosarcoma tuberculosis common variable immunodeficiency immunodeficiency, common variable, 10 Heat Stroke primary cutaneous T-cell non-Hodgkin lymphoma rheumatoid arthritis atopic eczema mantle cell lymphoma plasma cell myeloma agammaglobulinemia B cell deficiency deficiency in anterior pituitary function - variable immunodeficiency syndrome immunodeficiency, common variable, 1 lung cancer osteosarcoma tuberculosis allergic rhinitis cancer granulomatous slack skin disease pancreatic ductal adenocarcinoma