5ZBA
Crystal structure of Rtt109-Asf1-H3-H4-CoA complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2 Family | ASF1-like | 8067064 | 4007545 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | ASF1-like | 8067065 | 3002057 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Core histone-like | 8036585 | 3001387 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Core histone-like | 8036586 | 3001387 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | HAT_KAT11 | e5zbaA1 | A: a+b three layers | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) (From Topology) | T: Acyl-CoA N-acyltransferases (Nat) | F: HAT_KAT11 | ECOD (1.6) |
B | ASF1_hist_chap | e5zbaB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: ASF1_hist_chap | ECOD (1.6) |
C | Histone | e5zbaC1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
D | Histone_1 | e5zbaD1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.60.40.1490 | Mainly Beta | Sandwich | Immunoglobulin-like | Histone chaperone ASF1-like | CATH (4.3.0) |
C | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (4.3.0) |
D | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08214 | Histone acetylation protein (HAT_KAT11) | Histone acetylation protein | Histone acetylation is required in many cellular processes including transcription, DNA repair, and chromatin assembly. This family contains the fungal KAT11 protein (previously known as RTT109) which is required for H3K56 acetylation. Loss of KAT11 ... | Domain | |
PF04729 | ASF1 like histone chaperone (ASF1_hist_chap) | ASF1 like histone chaperone | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013178 | Histone acetyltransferase Rtt109/CBP | Family | |
IPR051236 | Histone acetyltransferase RTT109-like | Family | |
IPR016849 | Histone acetyltransferase Rtt109 | Family | |
IPR017282 | Histone deposition protein Asf1 | Family | |
IPR036747 | Histone chaperone ASF1-like superfamily | Homologous Superfamily | |
IPR006818 | Histone chaperone ASF1-like | Family | |
IPR009072 | Histone-fold | Homologous Superfamily | |
IPR007125 | Histone H2A/H2B/H3 | Domain | |
IPR000164 | Histone H3/CENP-A | Family | |
IPR009072 | Histone-fold | Homologous Superfamily | |
IPR035425 | CENP-T/Histone H4, histone fold | Domain | |
IPR001951 | Histone H4 | Family | |
IPR019809 | Histone H4, conserved site | Conserved Site |