5Z7L
Crystal structure of NDP52 SKICH region in complex with NAP1
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | CALCOCO1 | e5z7lA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: CALCOCO1 | ECOD (1.6) |
B | CALCOCO1 | e5z7lB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: CALCOCO1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.2840 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
B | 2.60.40.2840 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF17751 | SKICH domain (SKICH) | SKICH domain | The SKICH domains of SKIP and PIPP mediate plasma membrane localisation. The functions of the SKICH domains of NDP52 and CALCOCO1 are not known. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR041611 | SKICH domain | Domain | |
IPR051002 | Ubiquitin-binding and autophagy-associated domain-containing protein | Family | |
IPR041641 | CALCOCO1/2, zinc finger UBZ1-type | Domain | |
IPR024581 | Tbk1/Ikki binding domain | Domain | |
IPR051891 | TBK1 and IKBKE adapter proteins | Family |