Annotations: 5YLG

Crystal Structure of LysM domain from pteris ryukyuensis chitinase A

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d5ylga_	Alpha and beta proteins (a+b)	LysM domain	LysM domain	automated matches	automated matches	(Pteris ryukyuensis ) [TaxId: 367335 ],	SCOPe (2.08)
B	d5ylgb_	Alpha and beta proteins (a+b)	LysM domain	LysM domain	automated matches	automated matches	(Pteris ryukyuensis ) [TaxId: 367335 ],	SCOPe (2.08)
C	d5ylgc_	Alpha and beta proteins (a+b)	LysM domain	LysM domain	automated matches	automated matches	(Pteris ryukyuensis ) [TaxId: 367335 ],	SCOPe (2.08)
D	d5ylgd_	Alpha and beta proteins (a+b)	LysM domain	LysM domain	automated matches	automated matches	(Pteris ryukyuensis ) [TaxId: 367335 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	LysM domain-like	8076157	3001938	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	LysM domain-like	8076157	3001938	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	LysM domain-like	8076157	3001938	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	LysM domain-like	8076157	3001938	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Tyrosinase	e5ylgA1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
B	Tyrosinase	e5ylgB1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
C	Tyrosinase	e5ylgC1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
D	Transglut_prok	e5ylgD1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Transglut_prok	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.350.10	Alpha Beta	Roll	Membrane-bound Lytic Murein Transglycosylase D	Chain A	CATH (4.3.0)
B	3.10.350.10	Alpha Beta	Roll	Membrane-bound Lytic Murein Transglycosylase D	Chain A	CATH (4.3.0)
C	3.10.350.10	Alpha Beta	Roll	Membrane-bound Lytic Murein Transglycosylase D	Chain A	CATH (4.3.0)
D	3.10.350.10	Alpha Beta	Roll	Membrane-bound Lytic Murein Transglycosylase D	Chain A	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Chitinase A	hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	carbohydrate metabolic process primary metabolic process metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR000677	Chitinase-like	Family
A, B, C, D	IPR036779	LysM domain superfamily	Homologous Superfamily
A, B, C, D	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A, B, C, D	IPR001579	Glycosyl hydrolase family 18, active site	Active Site
A, B, C, D	IPR018392	LysM domain	Domain
A, B, C, D	IPR001223	Glycoside hydrolase family 18, catalytic domain	Domain

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