5Y6J

Structure of Tomato spotted wilt virus nucleocapsid protein with alternative oligomerization state

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyTospovirus nucleocapsid protein-like 8089915 4007690 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPepMV Coat protein-like 8089916 3002401 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyPepMV Coat protein-like 8089916 3002401 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPepMV Coat protein-like 8089916 3002401 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATospo_nucleocape5y6jA1 A: alpha complex topologyX: Leanyer virus nucleoprotein-related (From Topology)H: Leanyer virus nucleoprotein-related (From Topology)T: Leanyer virus nucleoprotein-relatedF: Tospo_nucleocapECOD (1.6)
BTospo_nucleocape5y6jB1 A: alpha complex topologyX: Leanyer virus nucleoprotein-related (From Topology)H: Leanyer virus nucleoprotein-related (From Topology)T: Leanyer virus nucleoprotein-relatedF: Tospo_nucleocapECOD (1.6)
CTospo_nucleocape5y6jC1 A: alpha complex topologyX: Leanyer virus nucleoprotein-related (From Topology)H: Leanyer virus nucleoprotein-related (From Topology)T: Leanyer virus nucleoprotein-relatedF: Tospo_nucleocapECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Nucleoprotein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR002517Tospovirus nucleocapsid proteinFamily