5XXK
Structure-activity studies of Mdm2/Mdm4-binding stapled peptides comprising non-natural amino acids
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SWIB | e5xxkA1 | A: alpha arrays | X: SWIB/MDM2 domain (From Topology) | H: SWIB/MDM2 domain (From Topology) | T: SWIB/MDM2 domain | F: SWIB | ECOD (1.6) |
B | SWIB | e5xxkB1 | A: alpha arrays | X: SWIB/MDM2 domain (From Topology) | H: SWIB/MDM2 domain (From Topology) | T: SWIB/MDM2 domain | F: SWIB | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.245.10 | Mainly Alpha | Orthogonal Bundle | MDM2 | SWIB/MDM2 domain | CATH (4.3.0) |
B | 1.10.245.10 | Mainly Alpha | Orthogonal Bundle | MDM2 | SWIB/MDM2 domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02201 | SWIB/MDM2 domain (SWIB) | SWIB/MDM2 domain | This family includes the SWIB domain and the MDM2 domain [1]. The p53-associated protein (MDM2) is an inhibitor of the p53 tumour suppressor gene binding the transactivation domain and down regulating the ability of p53 to activate transcription. Thi ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003121 | SWIB/MDM2 domain | Domain | |
IPR016495 | p53 negative regulator Mdm2/Mdm4 | Family | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR001876 | Zinc finger, RanBP2-type | Domain | |
IPR036443 | Zinc finger, RanBP2-type superfamily | Homologous Superfamily | |
IPR036885 | SWIB/MDM2 domain superfamily | Homologous Superfamily | |
IPR044080 | MDM2, modified RING finger, HC subclass | Domain | |
IPR001841 | Zinc finger, RING-type | Domain | |
IPR028340 | E3 ubiquitin-protein ligase Mdm2 | Family |
Pharos: Disease Associations Pharos Homepage Annotation
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
0EH | ||
6CW | Parent Component: TRP :  AA0180 :  6'-chloro-L-tryptophan MOD:00886 | |
MK8 | Parent Component: LEU :  AA0180 | |
NH2 | AA0180 , AA0081 , AA0083 , AA0084 , AA0086 , AA0087 , AA0088 , AA0090 , AA0091 , AA0092 , AA0093 , AA0095 , AA0096 , AA0097 , AA0098 , AA0099 , AA0100 :  6'-chloro-L-tryptophan MOD:00886 , L-alanine amide MOD:00090 , L-asparagine amide MOD:00092 , L-aspartic acid 1-amide MOD:00093 , L-glutamine amide MOD:00095 , L-glutamic acid 1-amide MOD:00096 , glycine amide MOD:00097 , L-isoleucine amide MOD:00099 , L-leucine amide MOD:00100 , L-lysine amide MOD:00101 , L-methionine amide MOD:00102 , L-proline amide MOD:00104 , L-serine amide MOD:00105 , L-threonine amide MOD:00106 , L-tryptophan amide MOD:00107 , L-tyrosine amide MOD:00108 , L-valine amide MOD:00109 | :  |
THC | Parent Component: THR :  AA0180 , AA0081 , AA0083 , AA0084 , AA0086 , AA0087 , AA0088 , AA0090 , AA0091 , AA0092 , AA0093 , AA0095 , AA0096 , AA0097 , AA0098 , AA0099 , AA0100 |