5XRW
Crystal structure of flagellar motor switch complex from H. pylori
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | d5xrwc_ | All beta proteins | Surface presentation of antigens (SPOA) | Surface presentation of antigens (SPOA) | automated matches | automated matches | (Helicobacter pylori 26695 ) [TaxId: 85962 ], | SCOPe (2.08) |
D | d5xrwd_ | All beta proteins | Surface presentation of antigens (SPOA) | Surface presentation of antigens (SPOA) | automated matches | automated matches | (Helicobacter pylori 26695 ) [TaxId: 85962 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Surface presentation of antigens (SPOA)-like | 8058626 | 4000884 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | Surface presentation of antigens (SPOA) | 8058627 | 3001883 | SCOP2 (2021-05-27) |
B | SCOP2B Superfamily | Surface presentation of antigens (SPOA) | 8058627 | 3001883 | SCOP2B (2021-05-27) |
C | SCOP2 Family | Surface presentation of antigens (SPOA)-like | 8058624 | 4000884 | SCOP2 (2021-05-27) |
C | SCOP2 Superfamily | Surface presentation of antigens (SPOA) | 8058625 | 3001883 | SCOP2 (2021-05-27) |
D | SCOP2B Superfamily | Surface presentation of antigens (SPOA) | 8058625 | 3001883 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01052 | e5xrwA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Surface presentation of antigens (SPOA) | F: PF01052 | ECOD (1.6) |
B | PF01052 | e5xrwB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Surface presentation of antigens (SPOA) | F: PF01052 | ECOD (1.6) |
C | PF01052 | e5xrwC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Surface presentation of antigens (SPOA) | F: PF01052 | ECOD (1.6) |
D | PF01052 | e5xrwD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Surface presentation of antigens (SPOA) | F: PF01052 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.330.10 | Mainly Beta | Roll | Surface presentation of antigens (SPOA) | SpoA-like | CATH (4.3.0) |
B | 2.30.330.10 | Mainly Beta | Roll | Surface presentation of antigens (SPOA) | SpoA-like | CATH (4.3.0) |
C | 2.30.330.10 | Mainly Beta | Roll | Surface presentation of antigens (SPOA) | SpoA-like | CATH (4.3.0) |
D | 2.30.330.10 | Mainly Beta | Roll | Surface presentation of antigens (SPOA) | SpoA-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01052 | Type III flagellar switch regulator (C-ring) FliN C-term (FliMN_C) | Type III flagellar switch regulator (C-ring) FliN C-term | - | Family | |
PF01052 | Type III flagellar switch regulator (C-ring) FliN C-term (FliMN_C) | Type III flagellar switch regulator (C-ring) FliN C-term | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
FliN | ||||
FliY |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001172 | Flagellar motor switch FliN/Type III secretion HrcQb | Family | |
IPR001543 | Flagellar motor switch protein FliN-like, C-terminal domain | Domain | |
IPR012826 | Flagellar motor switch FliN | Family | |
IPR036429 | SpoA-like superfamily | Homologous Superfamily | |
IPR001172 | Flagellar motor switch FliN/Type III secretion HrcQb | Family | |
IPR001543 | Flagellar motor switch protein FliN-like, C-terminal domain | Domain | |
IPR012826 | Flagellar motor switch FliN | Family | |
IPR028976 | CheC-like superfamily | Homologous Superfamily | |
IPR036429 | SpoA-like superfamily | Homologous Superfamily |