5XFM
Crystal structure of beta-arabinopyranosidase
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF14509 | e5xfmA1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF14509 | ECOD (1.6) |
A | PF14508 | e5xfmA3 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: PF14508 | ECOD (1.6) |
A | PF10566 | e5xfmA2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF10566 | ECOD (1.6) |
B | PF14509 | e5xfmB2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF14509 | ECOD (1.6) |
B | PF14508 | e5xfmB1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: PF14508 | ECOD (1.6) |
B | PF10566 | e5xfmB3 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF10566 | ECOD (1.6) |
C | PF14509 | e5xfmC3 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF14509 | ECOD (1.6) |
C | PF14508 | e5xfmC2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: PF14508 | ECOD (1.6) |
C | PF10566 | e5xfmC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF10566 | ECOD (1.6) |
D | PF14509 | e5xfmD3 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF14509 | ECOD (1.6) |
D | PF14508 | e5xfmD1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: PF14508 | ECOD (1.6) |
D | PF10566 | e5xfmD2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF10566 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14508 | Glycosyl-hydrolase 97 N-terminal (GH97_N) | Glycosyl-hydrolase 97 N-terminal | This N-terminal domain of glycosyl-hydrolase-97 [1]contributes part of the active site pocket. It is also important for contact with the catalytic and C-terminal domains of the whole [2,3]. | Domain | |
PF14509 | Glycosyl-hydrolase 97 C-terminal, oligomerisation (GH97_C) | Glycosyl-hydrolase 97 C-terminal, oligomerisation | Glycosyl-hydrolase-97 is made up of three tightly linked and highly conserved globular domains. The C-terminal domain is found to be necessary for oligomerisation of the whole molecule in order to create the active-site pocket and the Ca++-binding s ... | Domain | |
PF10566 | Glycoside hydrolase 97 (Glyco_hydro_97) | Glycoside hydrolase 97 | This domain is the catalytic region of the bacterial glycosyl-hydrolase family 97. This central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-termina ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Alpha-glucosidase | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR019563 | Glycosyl-hydrolase 97, catalytic domain | Domain | |
IPR029486 | Glycosyl-hydrolase 97, N-terminal domain | Domain | |
IPR029483 | Glycosyl-hydrolase 97, C-terminal oligomerisation domain | Domain | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily | |
IPR014718 | Glycoside hydrolase-type carbohydrate-binding | Homologous Superfamily | |
IPR013780 | Glycosyl hydrolase, all-beta | Homologous Superfamily |