5X7R
Crystal structure of Paenibacillus sp. 598K alpha-1,6-glucosyltransferase complexed with isomaltohexaose
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e5x7rA5 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF16990 | e5x7rA1 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF16990 | ECOD (1.6) |
A | PF21365 | e5x7rA6 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF21365 | ECOD (1.6) |
A | F_UNCLASSIFIED | e5x7rA2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF17137 | e5x7rA4 | A: beta sandwiches | X: Putative glucosidase YicI, C-terminal domain (From Topology) | H: Putative glucosidase YicI, C-terminal domain (From Topology) | T: Putative glucosidase YicI, C-terminal domain | F: PF17137 | ECOD (1.6) |
A | PF01055 | e5x7rA7 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01055 | ECOD (1.6) |
B | F_UNCLASSIFIED | e5x7rB7 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF16990 | e5x7rB2 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF16990 | ECOD (1.6) |
B | PF21365 | e5x7rB5 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF21365 | ECOD (1.6) |
B | F_UNCLASSIFIED | e5x7rB4 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF17137 | e5x7rB3 | A: beta sandwiches | X: Putative glucosidase YicI, C-terminal domain (From Topology) | H: Putative glucosidase YicI, C-terminal domain (From Topology) | T: Putative glucosidase YicI, C-terminal domain | F: PF17137 | ECOD (1.6) |
B | PF01055 | e5x7rB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01055 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21365 | Glycosyl hydrolase family 31 C-terminal domain (Glyco_hydro_31_3rd) | Glycosyl hydrolase family 31 C-terminal domain | Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases. This entry represents the 3rd beta sandwich domain. | Domain | |
PF16990 | Carbohydrate binding module (family 35) (CBM_35) | Carbohydrate binding module (family 35) | This is a mannan-specific carbohydrate binding domain, previously known as the X4 module [1]. Unlike other carbohydrate binding modules, binding to substrate causes a conformational change [2]. | Domain | |
PF01055 | Glycosyl hydrolases family 31 TIM-barrel domain (Glyco_hydro_31_2nd) | Glycosyl hydrolases family 31 TIM-barrel domain | Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases. This entry corresponds to the second domain of family 31 enzymes and adopts a TIM-barrel fold. | Domain | |
PF17137 | Domain of unknown function (DUF5110) (DUF5110) | Domain of unknown function (DUF5110) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Glycoside hydrolase family 31 alpha-glucosidase | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000322 | Glycoside hydrolase family 31, TIM barrel domain | Domain | |
IPR048395 | Glycosyl hydrolase family 31, C-terminal domain | Domain | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR051816 | Glycosyl Hydrolase Family 31 | Family | |
IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily | |
IPR033403 | Domain of unknown function DUF5110 | Domain | |
IPR005084 | Carbohydrate binding module family 6 | Domain | |
IPR013780 | Glycosyl hydrolase, all-beta | Homologous Superfamily | |
IPR011013 | Galactose mutarotase-like domain superfamily | Homologous Superfamily |