5X6M
Crystal Structure of SMAD5-MH1 in complex with a composite DNA sequence
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | SMAD MH1 domain | 8083634 | 3001158 | SCOP2B (2021-05-27) |
D [auth A] | SCOP2B Superfamily | SMAD MH1 domain | 8083634 | 3001158 | SCOP2B (2021-05-27) |
E | SCOP2B Superfamily | SMAD MH1 domain | 8083634 | 3001158 | SCOP2B (2021-05-27) |
H [auth F] | SCOP2B Superfamily | SMAD MH1 domain | 8083634 | 3001158 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF03165 | e5x6mB1 | A: few secondary structure elements | X: His-Me finger endonucleases (From Homology) | H: His-Me finger endonucleases | T: His-Me finger endonucleases | F: PF03165 | ECOD (1.6) |
D [auth A] | PF03165 | e5x6mA1 | A: few secondary structure elements | X: His-Me finger endonucleases (From Homology) | H: His-Me finger endonucleases | T: His-Me finger endonucleases | F: PF03165 | ECOD (1.6) |
E | PF03165 | e5x6mE1 | A: few secondary structure elements | X: His-Me finger endonucleases (From Homology) | H: His-Me finger endonucleases | T: His-Me finger endonucleases | F: PF03165 | ECOD (1.6) |
H [auth F] | PF03165 | e5x6mF1 | A: few secondary structure elements | X: His-Me finger endonucleases (From Homology) | H: His-Me finger endonucleases | T: His-Me finger endonucleases | F: PF03165 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 3.90.520.10 | Alpha Beta | Alpha-Beta Complex | Smad3 | Chain A | CATH (4.3.0) |
D [auth A] | 3.90.520.10 | Alpha Beta | Alpha-Beta Complex | Smad3 | Chain A | CATH (4.3.0) |
E | 3.90.520.10 | Alpha Beta | Alpha-Beta Complex | Smad3 | Chain A | CATH (4.3.0) |
H [auth F] | 3.90.520.10 | Alpha Beta | Alpha-Beta Complex | Smad3 | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], D [auth A], E, H [auth F] | PF03165 | MH1 domain (MH1) | MH1 domain | The MH1 (MAD homology 1) domain is found at the amino terminus of MAD related proteins such as Smads. This domain is separated from the MH2 domain by a non-conserved linker region. The crystal structure of the MH1 domain shows that a highly conserved ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], D [auth A], E, H [auth F] | IPR013790 | Dwarfin | Family |
A [auth B], D [auth A], E, H [auth F] | IPR036578 | SMAD MH1 domain superfamily | Homologous Superfamily |
A [auth B], D [auth A], E, H [auth F] | IPR003619 | MAD homology 1, Dwarfin-type | Domain |
A [auth B], D [auth A], E, H [auth F] | IPR008984 | SMAD/FHA domain superfamily | Homologous Superfamily |
A [auth B], D [auth A], E, H [auth F] | IPR017855 | SMAD-like domain superfamily | Homologous Superfamily |
A [auth B], D [auth A], E, H [auth F] | IPR001132 | SMAD domain, Dwarfin-type | Domain |
A [auth B], D [auth A], E, H [auth F] | IPR013019 | MAD homology, MH1 | Domain |