5WWZ
Crystal structure of the KH2 domain of human RNA-binding E3 ubiquitin-protein ligase MEX-3C
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | KH_1 | e5wwzB1 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Eukaryotic type KH-domain (KH-domain type I) | F: KH_1 | ECOD (1.6) |
B [auth A] | KH_1 | e5wwzA1 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Eukaryotic type KH-domain (KH-domain type I) | F: KH_1 | ECOD (1.6) |
C | KH_1 | e5wwzC1 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Eukaryotic type KH-domain (KH-domain type I) | F: KH_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 3.30.1370.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S8 | Chain: A, domain 1 | CATH (4.3.0) |
B [auth A] | 3.30.1370.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S8 | Chain: A, domain 1 | CATH (4.3.0) |
C | 3.30.1370.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S8 | Chain: A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A], C | PF00013 | KH domain (KH_1) | KH domain | KH motifs bind RNA in vitro. Autoantibodies to Nova, a KH domain protein, cause paraneoplastic opsoclonus ataxia. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A], C | IPR047226 | RNA-binding protein MEX-3, second type I KH domain | Domain |
A [auth B], B [auth A], C | IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily |
A [auth B], B [auth A], C | IPR047227 | RNA-binding protein MEX3 | Family |
A [auth B], B [auth A], C | IPR004087 | K Homology domain | Domain |
A [auth B], B [auth A], C | IPR047228 | RNA-binding protein MEX-3, first type I KH domain | Domain |
A [auth B], B [auth A], C | IPR036612 | K Homology domain, type 1 superfamily | Homologous Superfamily |
A [auth B], B [auth A], C | IPR001841 | Zinc finger, RING-type | Domain |
A [auth B], B [auth A], C | IPR004088 | K Homology domain, type 1 | Domain |