Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth G]SCOP2B SuperfamilySecretin repeat domain-like 8057216 3002387 SCOP2B (2022-06-29)
B [auth O]SCOP2B SuperfamilySecretin repeat domain-like 8057216 3002387 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilySecretin repeat domain-like 8057216 3002387 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilySecretin repeat domain-like 8057216 3002387 SCOP2B (2022-06-29)
E [auth C]SCOP2B SuperfamilySecretin repeat domain-like 8057216 3002387 SCOP2B (2022-06-29)
F [auth D]SCOP2B SuperfamilySecretin repeat domain-like 8057216 3002387 SCOP2B (2022-06-29)
G [auth E]SCOP2B SuperfamilySecretin repeat domain-like 8057216 3002387 SCOP2B (2022-06-29)
H [auth F]SCOP2B SuperfamilySecretin repeat domain-like 8057216 3002387 SCOP2B (2022-06-29)
I [auth H]SCOP2B SuperfamilySecretin repeat domain-like 8057216 3002387 SCOP2B (2022-06-29)
J [auth I]SCOP2B SuperfamilySecretin repeat domain-like 8057216 3002387 SCOP2B (2022-06-29)
K [auth J]SCOP2B SuperfamilySecretin repeat domain-like 8057216 3002387 SCOP2B (2022-06-29)
L [auth K]SCOP2B SuperfamilySecretin repeat domain-like 8057216 3002387 SCOP2B (2022-06-29)
M [auth L]SCOP2B SuperfamilySecretin repeat domain-like 8057216 3002387 SCOP2B (2022-06-29)
N [auth M]SCOP2B SuperfamilySecretin repeat domain-like 8057216 3002387 SCOP2B (2022-06-29)
O [auth N]SCOP2B SuperfamilySecretin repeat domain-like 8057216 3002387 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth G]Secretin_Ne5wlnG2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
A [auth G]Secretine5wlnG1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
B [auth O]Secretin_Ne5wlnO2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
B [auth O]Secretine5wlnO1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
C [auth A]Secretin_Ne5wlnA2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
C [auth A]Secretine5wlnA1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
D [auth B]Secretin_Ne5wlnB2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
D [auth B]Secretine5wlnB1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
E [auth C]Secretin_Ne5wlnC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
E [auth C]Secretine5wlnC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
F [auth D]Secretin_Ne5wlnD2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
F [auth D]Secretine5wlnD1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
G [auth E]Secretin_Ne5wlnE2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
G [auth E]Secretine5wlnE1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
H [auth F]Secretin_Ne5wlnF2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
H [auth F]Secretine5wlnF1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
I [auth H]Secretin_Ne5wlnH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
I [auth H]Secretine5wlnH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
J [auth I]Secretin_Ne5wlnI2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
J [auth I]Secretine5wlnI1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
K [auth J]Secretin_Ne5wlnJ2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
K [auth J]Secretine5wlnJ1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
L [auth K]Secretin_Ne5wlnK2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
L [auth K]Secretine5wlnK1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
M [auth L]Secretin_Ne5wlnL2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
M [auth L]Secretine5wlnL1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
N [auth M]Secretin_Ne5wlnM2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
N [auth M]Secretine5wlnM1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)
O [auth N]Secretin_Ne5wlnN2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: Secretin_NECOD (1.6)
O [auth N]Secretine5wlnN1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: Ring-building motif II in type III secretion system (From Topology)T: Ring-building motif II in type III secretion systemF: SecretinECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth G]3.30.1370.120 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (utative)
B [auth O]3.30.1370.120 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (utative)
C [auth A]3.30.1370.120 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (utative)
D [auth B]3.30.1370.120 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (utative)
E [auth C]3.30.1370.120 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (utative)
F [auth D]3.30.1370.120 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (utative)
G [auth E]3.30.1370.120 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (utative)
H [auth F]3.30.1370.120 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (utative)
I [auth H]3.30.1370.120 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (utative)
J [auth I]3.30.1370.120 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (utative)
K [auth J]3.30.1370.120 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (4.3.0)
L [auth K]3.30.1370.120 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (utative)
M [auth L]3.30.1370.120 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (utative)
N [auth M]3.30.1370.120 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (utative)
O [auth N]3.30.1370.120 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03958Bacterial type II/III secretion system short domain (Secretin_N)Bacterial type II/III secretion system short domainThis is a short, often repeated, domain found in bacterial type II/III secretory system proteins. All previous NolW-like domains fall into this family.Domain
PF00263Bacterial type II and III secretion system protein (Secretin)Bacterial type II and III secretion system protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Type II secretion system protein D

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR050810Bacterial Secretion System Channel ProteinFamily
IPR005644NolW-likeDomain
IPR004846Type II/III secretion system, secretin-like domainDomain
IPR038591NolW-like superfamilyHomologous Superfamily
IPR049371GspD-like, N0 domainDomain
IPR004845Type II secretion system protein GspD, conserved siteConserved Site
IPR013356Type II secretion system protein GspDFamily
IPR001775GspD/PilQ familyFamily