5WFE
Cas1-Cas2-IHF-DNA holo-complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
E | SCOP2B Superfamily | Cas2-like | 8090691 | 3001363 | SCOP2B (2021-05-27) |
F | SCOP2B Superfamily | Cas2-like | 8090691 | 3001363 | SCOP2B (2021-05-27) |
K | SCOP2B Superfamily | IHF-like DNA-binding proteins | 8034409 | 3000426 | SCOP2B (2021-05-27) |
L | SCOP2B Superfamily | IHF-like DNA-binding proteins | 8034410 | 3000426 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01867 | e5wfeA1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
B | PF01867 | e5wfeB1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
C | PF01867 | e5wfeC1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
D | PF01867 | e5wfeD1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
E | PF09707 | e5wfeE1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR associated protein Cas2-like (From Topology) | T: CRISPR associated protein Cas2-like | F: PF09707 | ECOD (1.6) |
F | PF09707 | e5wfeF1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR associated protein Cas2-like (From Topology) | T: CRISPR associated protein Cas2-like | F: PF09707 | ECOD (1.6) |
K | PF00216 | e5wfeK1 | A: alpha arrays | X: HTH | H: IHF-like DNA-binding proteins (From Topology) | T: IHF-like DNA-binding proteins | F: PF00216 | ECOD (1.6) |
L | PF00216 | e5wfeL1 | A: alpha arrays | X: HTH | H: IHF-like DNA-binding proteins (From Topology) | T: IHF-like DNA-binding proteins | F: PF00216 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01867 | CRISPR associated protein Cas1 (Cas_Cas1) | CRISPR associated protein Cas1 | - | Family | |
PF09707 | CRISPR-associated protein (Cas_Cas2CT1978) (Cas_Cas2CT1978) | CRISPR-associated protein (Cas_Cas2CT1978) | - | Family | |
PF00216 | Bacterial DNA-binding protein (Bac_DNA_binding) | Bacterial DNA-binding protein | - | Domain | |
PF00216 | Bacterial DNA-binding protein (Bac_DNA_binding) | Bacterial DNA-binding protein | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002729 | CRISPR-associated protein Cas1 | Family | |
IPR033641 | CRISPR-associated protein Cas1, type I-E | Family | |
IPR042206 | CRISPR-associated endonuclease Cas1, C-terminal domain | Homologous Superfamily | |
IPR042211 | CRISPR-associated endonuclease Cas1, N-terminal domain | Homologous Superfamily | |
IPR019851 | CRISPR-associated protein Cas1, ECOLI subtype | Family | |
IPR010152 | CRISPR-associated protein Cas2 subtype | Family | |
IPR010992 | Integration host factor (IHF)-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR020816 | Histone-like DNA-binding protein, conserved site | Conserved Site | |
IPR005684 | Integration host factor, alpha subunit | Family | |
IPR000119 | Histone-like DNA-binding protein | Family | |
IPR010992 | Integration host factor (IHF)-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR020816 | Histone-like DNA-binding protein, conserved site | Conserved Site | |
IPR005685 | Integration host factor, beta subunit | Family | |
IPR000119 | Histone-like DNA-binding protein | Family |